Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6559 134 1e-26 seq6476 134 1e-26 seq34430 131 2e-25 seq61286 122 9e-23 seq34431 105 7e-18 seq6487 93.3 4e-14 >seq6559 Length=1815223 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| | | || ||| || || |||| ||| || ||||| |||||||||||||| | Sbjct 1626022 CCGCCTCTAAGTCGAAGTACAAGGTGAAGCGTGGACTCTTTCTGAATGTTGTAATCAGAA 1625963 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || ||||| || ||||| | || | || |||||| || |||||| Sbjct 1625962 AGTGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATTAACCTCTGCTGATCTGGAGGA 1625903 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || |||||||| ||||| ||||| ||| || || | || ||| || || ||| Sbjct 1625902 ATACCTTCTTTGTCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCAGACGCCTCAACT 1625843 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || ||||| ||||| |||||||| ||||| Sbjct 1625842 TCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 1625796 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | ||| | |||| ||| | || |||||||| |||||||| ||||| | Sbjct 1625111 ACCACCGCGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGA 1625052 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || || || || || |||||| | || | || ||||| || || || Sbjct 1625051 GAGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGG 1624992 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 |||||||| || ||||| ||||| ||||| ||| ||| | || || || || | Sbjct 1624991 GATTCCTTCCTTGTCTTGAATTTTG-GCTTTGACATTCTCGATCGTGTCTGACGCCTCAA 1624933 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| | || | |||||| || |||||||| || |||||||||||||| Sbjct 1624932 CTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 1624884 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| | || | ||| | ||| ||||||||||||||||||||||| | Sbjct 1625339 ACCACCACGAAGTCTCAAAACCAAATGCAACGTGGATTCTTTTTGAATGTTGTAATCAGA 1625280 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || ||||| || ||||| | || | | |||||| || || || Sbjct 1625279 AAGCGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGG 1625220 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 |||||||| || || || ||||| ||||| || ||| | || ||| || || | Sbjct 1625219 GATTCCTTCCTTATCCTGAATTTTG-GCTTTGACGTTCTCGATCGTGTCAGATGCCTCAA 1625161 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | ||| || || || || ||||| |||||||||||||| Sbjct 1625160 CCTCCAGTGTGATGGTTTTTCCTGTTAAGGTTTTAACGAAAATTTGCAT 1625112 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| || || || | ||| | || ||||| || || || ||||| |||| Sbjct 1624654 CCACCACGCAGTCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCTGAC 1624595 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||||| |||| || |||||||| || || | || | |||||||| || || || Sbjct 1624594 AAGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGGG 1624535 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| || || || || ||||| ||| ||| | || || || || || Sbjct 1624534 ATGCCTTCTTTATCCTGAATCTTC-GCTTTGACATTCTCAATCGTGTCCGAAGCTTCGAC 1624476 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | ||| | ||||| || ||||||||||| ||||| || |||||| Sbjct 1624475 CTCCAAAGTGATAGTCTTTCCTGTCAAAGTTTTAACGAAGATCTGCATT 1624427 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || ||||| || ||||||||||| || | | ||||| |||| || Sbjct 1625776 ACCAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGTGTGCGGCCGTCCTCG 1625717 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 ||||| || || || | || | | |||||| || || || || |||||||| || || Sbjct 1625716 AGCTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGA 1625657 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 ||||| ||| ||| || | || ||| || || ||||| | || | |||||| Sbjct 1625656 ATTTTCGCCTTCACATTTTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGTCTTT 1625597 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||| ||||| |||||||| ||||| Sbjct 1625596 CCTGTCAAGGTTTTGACGAAAATCTGCAT 1625568 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | ||| | || ||||| | || ||||| || ||||||||||| || | Sbjct 1625567 ACCTCCGCGAAGTCTCAAAACAAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGA 1625508 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || ||||| || ||||| | || | | |||||| || || || Sbjct 1625507 CAGTGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGG 1625448 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || ||||| || || || | |||| ||||| ||| || | ||| || || || | Sbjct 1625447 GATACCTTCCTTGTCCTG-AATTTTGGCTTTGACATTTTCGATTGTGTCCGAAGCCTCAA 1625389 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | ||| || || || | || || |||||||| ||||| Sbjct 1625388 CCTCCAGTGTGATGGTTTTACCCGTGAGCGTCTTGACGAAAATCTGCAT 1625340 >seq6476 Length=10381176 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||| ||||||||||| | | ||| | ||||||| ||||||||||| Sbjct 5657330 GTAGATTCTTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCGTCTTCCAGCTGCTTGCCA 5657271 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| | ||||| || || || |||||||||||||| || || ||||| ||| Sbjct 5657270 GCGAAAATCAAACGCTGTTGATCCGGTGGAATTCCTTCTTTGTCCTGGATTTTGGCCTTC 5657211 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||| ||| ||| || ||||| | || | ||| |||||||| | |||| Sbjct 5657210 ACGTTTTCTATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTTTTGCCGGTGAGAGTT 5657151 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 5657150 TTCACGAAGATTTGCAT 5657134 Score = 125 bits (138), Expect = 7e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||| | ||| || ||||| || ||||| ||||||| | || | | ||| Sbjct 5657117 AGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAAAGAGTCCTGCCATCT 5657058 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || |||||||||||| |||| || |||||||| || || ||||| |||||||| ||| Sbjct 5657057 TCGAGTTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGGGGAATGCCTTCTTTGTCT 5656998 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||||| ||| | ||| ||| ||| || ||||| | || | ||| Sbjct 5656997 TGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTT 5656938 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | |||||| || || |||||||| Sbjct 5656937 TTGCCAGTGAGAGTTTTCACAAAGATTTGCAT 5656906 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || ||||||| ||| ||||| || || ||||||||||| | Sbjct 5656905 ACCTCCGCGAAGACGTAGAACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGA 5656846 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | || || || |||||||| ||| | || | || || || || ||||| Sbjct 5656845 AAGAGTTCTGCCATCCTCTAGTTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGG 5656786 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||| |||||||| || || | | || ||||| ||| ||| | || ||| || |||| Sbjct 5656785 AATACCTTCTTTGTCCTGGA-TCTTAGCTTTGACATTCTCTATAGTGTCAGAAGCTTCCA 5656727 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | ||| || || || | |||||| ||||| |||||||| Sbjct 5656726 CCTCGAGGGTGATGGTTTTTCCAGTAAGAGTTTTCACGAAGATTTGCAT 5656678 >seq34430 Length=319 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||| | ||| || ||||| || ||||| ||||||| | || | | ||| Sbjct 293 AGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAAAGAGTCCTGCCATCT 234 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || |||||||||||| |||| | |||||||| || || ||||| |||||||| ||| Sbjct 233 TCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGGGGAATGCCTTCTTTGTCT 174 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||||| ||| | ||| ||| ||| || ||||| | || | ||| Sbjct 173 TGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTT 114 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| | |||||| ||||| |||||||| Sbjct 113 TTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 82 >seq61286 Length=444 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| | || | ||| | ||| |||||||| |||||||||||||| | Sbjct 165 ACCACCACGAAGTCTCAATACCAAATGCAACGTGGATTCTTTCTGAATGTTGTAATCAGA 224 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || ||||| || |||||| | || | | |||||| || || || Sbjct 225 AAGCGTGCGGCCGTCCTCGAGCTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGGGG 284 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 |||||||| || || || | |||| ||||| || ||| | || ||| || || | Sbjct 285 GATTCCTTCCTTATCCTG-AATTTTGGCTTTGACGTTCTCGATCGTGTCAGACGCCTCAA 343 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| | || | |||||| || ||||| ||||| |||||||| ||||| Sbjct 344 CTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 392 >seq34431 Length=440 Score = 105 bits (116), Expect = 7e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || ||||| ||||||||||| ||||||| | || | | ||| Sbjct 186 AGAACCAGGTGAAGTGTAGATTCCTTTTGAATGTTATAATCTGAAAGAGTCCTGCCATCT 127 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || |||||||||||| |||| || ||||| || || || ||||| |||||||| ||| Sbjct 126 TCGAGTTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGGGGAATGCCTTCTTTGTCT 67 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||||| ||| | ||| ||| || || ||||| | || | ||| Sbjct 66 TGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGATGCTTCAACTTCGAGGGTGATGGTT 7 Query 64412 TTGCCG 64417 |||||| Sbjct 6 TTGCCG 1 >seq6487 Length=3923646 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 154031 AAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGATTC 154090 ||| || |||| || ||||| | || || | ||||| ||| ||||||||| |||||| Sbjct 1174761 AAATTCTCCGGACAGCACGCGCCTTACGTAGATGTTGCTTGTGTACGGCTCGATCGATTC 1174820 Query 154091 GTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAGTT 154150 ||| || ||||| || || || || | || || |||||| || | || | ||||| Sbjct 1174821 GTTATTCCCTAAAATCTGCGCCGTCGAGGCCGTTGGCATAGGTGCTATTAAAAGCGAGTT 1174880 Query 154151 TCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGTAGG 154210 | | |||||||| || || | || || || |||||| ||||| || || || Sbjct 1174881 CCTTACTCCGTGTTTCGCGATCTTCGCCTTCAATTCATCCCAATCCCACAGATTCGTCGG 1174940 Query 154211 TTGCACGTTCCACATGTCGTATTG 154234 | ||||||||||||||||| || Sbjct 1174941 CTTGACGTTCCACATGTCGTACTG 1174964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499158970378720