Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_011041.1 Length=137947 Score E Sequences producing significant alignments: (Bits) Value seq1985 127 2e-24 seq1998 123 2e-23 >seq1985 Length=318 Score = 127 bits (140), Expect = 2e-24 Identities = 215/311 (69%), Gaps = 1/311 (0%) Strand=Plus/Plus Query 49026 AGCCAACTGATTGGTTGGAATTTCTGCACGCTTAGGAACTGTGATGATCGGGTCGTAGAA 49085 |||||| | | || |||||| || || || |||| |||||||| ||||||||||| Sbjct 9 AGCCAAGTCCTGAGTAGGAATTGTAGCTCGTTTTGGAATGGTGATGATTGGGTCGTAGAA 68 Query 49086 TACATTATTGTCTTCGTCAAAACCTGTCAGGATCGCACCATTCTTAATGCCAGTATTGAT 49145 || || || || || ||| | || || | ||| | |||||| ||| || || || Sbjct 69 GACCTTGTTTTCCTCATCATATCCGGTTAAGATGGAACCATTACGAATACCTACGTTAAT 128 Query 49146 CGGGTTGTTCATCAGAACAGACTTGATAACCGGAAGATCATCGTCAGACATCTTCATGCT 49205 || | ||||| | |||| | | || | |||||||| |||||||||| Sbjct 129 AGGATCGTTCAGGATCACAGTGCTCAGGTTTGGCAAGTCATCGTCGCTCATCTTCATGGA 188 Query 49206 TAAACCCATATTGGAGCGGCGATGCATGTACCCAAACATGGATTCTTCAGATCTGAACTT 49265 | |||||| || ||||| | |||||||| || | || ||||| | |||||| Sbjct 189 CATACCCATGTTTGAGCGCTGGTGCATGTAGGAGAATACTGACTCTTCCATACGGAACTT 248 Query 49266 GATCCAGTGTGCAAAACGAATAGCGTCTGCATACTGACCTGAAGCACACTTACCTTCCCA 49325 | |||||| | || || ||| |||| |||||| |||| |||| ||| ||||| ||||| Sbjct 249 CAACCAGTGGGANAAGCGGATAACGTCAGCATACNGACCAGAAGAACATTTACC-TCCCA 307 Query 49326 GAAAGCGCCAA 49336 ||| ||||||| Sbjct 308 GAATGCGCCAA 318 >seq1998 Length=468 Score = 123 bits (136), Expect = 2e-23 Identities = 283/420 (67%), Gaps = 11/420 (3%) Strand=Plus/Plus Query 56818 TTATCGTTACCGAGGTTAATAAAGCCAGCACCGAAACGGTCAAGAATCGCCTTCTTACGG 56877 || || ||||| | ||| ||||||||||| ||||| ||||| | || | ||||||||| Sbjct 11 TTGTCATTACCTACGTTCATAAAGCCAGCGCCGAAGCGGTCCAAGATAGACTTCTTACGT 70 Query 56878 GCATCAATCAAATCTTTAGTGGAATACTGCTTACCCATACCGTCAACCCCCTTCAGAGTC 56937 || || | || |||| |||||||||||| ||| || | || || || ||| Sbjct 71 TCACTGATTAGGGCTGAAGTGCTATACTGCTTACCGGAACCTTCGATACCTTTAAGTGTC 130 Query 56938 ATGGAGTAAAGCTCTTTACCAGACTTATC--TC-TATCAGACGGAAGTATAAAGAAACTT 56994 |||||| || ||| | || || || |||| ||||| | || ||||| Sbjct 131 ATGGAG-AATGCT-----GGGGCGTTTTCCTTCATATCTGACGGCAACATGAAGAAGGCC 184 Query 56995 TGCTCACCACTATGGGCGTTTGCTGCGTCAAGCATAAGATCTGCAACCATTCTCCCTTCC 57054 |||||||| |||||||| || || || |||| | || |||||||| |||| Sbjct 185 TGCTCACCTGCGTGGGCGTTAGCCGCATCCTGCATCAATCCTTCAACCATTTCAGCTTCT 244 Query 57055 ATTGAATTCGGGTC-AATGCTGGCCTTGTTCAAAATATTGGAAGGAATTTTCAGCTCAAG 57113 |||| ||| | |||| |||||||| | ||| |||||||||| || ||||||| Sbjct 245 GGGCTATTCTTGTCGATTGCT-GCCTTGTTAAGGATACTGGAAGGAATCTTAAGCTCAAT 303 Query 57114 CACACCACCAAGGTCTTTGGAACAGCCAACAACCTCAAGGTTTTCAATCAGAACTTTCTC 57173 | || || ||||| || | || | || || | ||| ||||| ||||| || || Sbjct 304 GATCCCGCCGAGGTCCTTAGTTGCCCCGATGACTTCCAAGTTCTCAATAAGAACCTTTTC 363 Query 57174 ACGGAAAGATCTGTAGCAGCCTATCATCGGTGACACACCTGCAGGGTTAGATTCTGTTCC 57233 ||||||| | ||| || || | | ||||| ||||| |||||| || || || || Sbjct 364 TCGGAAAGCGCGGTAACAACCAACTAGAGGTGAAACACCCATAGGGTTTGAGTCAGTACC 423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440873299611360