Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6559 109 5e-19 seq6476 104 2e-17 seq34431 96.9 3e-15 seq34430 89.7 5e-13 seq61286 87.8 2e-12 seq6525 82.4 8e-11 >seq6559 Length=1815223 Score = 109 bits (120), Expect = 5e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 |||||| | ||| | | | || ||||| |||||||||||||| || || || ||| Sbjct 1625552 CAAAACAAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGTGTGCGGCCGTC 1625493 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||||| |||||||||| |||| | | ||| || || || || |||||||| ||||| Sbjct 1625492 CTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCTTCCTTGTC 1625433 Query 138522 GGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| |||| | ||| | | ||| | ||||| | | ||| ||||| | || | | Sbjct 1625432 C-TGAATTTTGGCTTTGACATTTTCGATTGTGTCCGAAGCCTCAACCTCCAGTGTGATGG 1625374 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || || || || || ||||||||||| Sbjct 1625373 TTTTACCCGTGAGCGTCTTGACGAAAATCTGCAT 1625340 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 |||||| | ||| | | | || ||||| |||||||||||||| || || || ||| Sbjct 1625780 CAAAACCAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGTGTGCGGCCGTC 1625721 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||||| |||||||| | |||| | | ||| || || || || |||||||||||||| Sbjct 1625720 CTCGAGCTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCTTCTTTGTC 1625661 Query 138522 GGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| |||| | || | | ||| | ||||| | || ||| || || | ||| | | Sbjct 1625660 C-TGAATTTTCGCCTTCACATTTTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGG 1625602 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || || |||| ||||| || ||||||||||| Sbjct 1625601 TCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 1625568 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || ||||||||||| || | || || ||||||||| |||||||||| Sbjct 1625989 GACTCTTTCTGAATGTTGTAATCAGAAAGTGTGCGGCCGTCCTCGAGCTGTTTACCGGCG 1625930 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||||| | ||| || || ||||| |||||||||||||| ||| |||| | || | Sbjct 1625929 AAGATTAACCTCTGCTGATCTGGAGGAATACCTTCTTTGTCT-TGAATTTTCGCCTTCAC 1625871 Query 138541 -TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | ||||| | || ||| || || | ||| | || || || |||| ||||| Sbjct 1625870 GTTTTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTT 1625811 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 1625810 GACGAAAATCTGCAT 1625796 Score = 100 bits (110), Expect = 3e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || ||||| | || ||||| | | || ||||| ||||| |||||||| Sbjct 1624882 CCACCACGTAAACGGAGCACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG-- 1624825 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| |||| |||||||| ||||| |||| | |||| | | |||||||||||| | Sbjct 1624824 AAAGTGTGCGACCATCCTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGGTCCGGTG 1624765 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 | || ||||||||||| ||| |||||| ||| | | || | ||||| | | || Sbjct 1624764 GAATGCCTTCTTTGTC-CTGAATTTTTGCTTTGACATTCTCGATTGTGTCCGAAGCTTCA 1624706 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || || || ||||| ||||| || || |||||||| Sbjct 1624705 ACCTCCAAAGTGATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 1624656 >seq6476 Length=10381176 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | ||||| ||| ||||| | | ||||| || || ||||| || || Sbjct 5657133 GCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGA 5657074 Query 138447 CATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| | || | || |||||||| || |||| | | || |||||||| || ||||| | Sbjct 5657073 AAGAGTCCTGCCA-TCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGGG 5657015 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || ||||||||||| ||| || ||||| | || | ||||| | | || | Sbjct 5657014 GAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGAGGCTTCAA 5656955 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||| || | ||||| ||||| |||||||| ||||| || ||||| Sbjct 5656954 CTTCGAGGGTGATGGTTTTGCCAGTGAGAGTTTTCACAAAGATTTGCAT 5656906 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||| | | || ||||| || |||||||| || Sbjct 5656904 CCTCCGCGAAGACGTAGAACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGAA 5656845 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | ||||| ||||| || || | | |||| | ||| ||||| || ||||| Sbjct 5656844 AGAGTTCTGCCA-TCCTCTAGTTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGG 5656786 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| || ||| | | || | ||||| | | ||||| Sbjct 5656785 AATACCTTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATAGTGTCAGAAGCTTCCAC 5656726 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| || | ||||| ||||| |||||||| || || || |||||| Sbjct 5656725 CTCGAGGGTGATGGTTTTTCCAGTAAGAGTTTTCACGAAGATTTGCATG 5656677 >seq34431 Length=440 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | ||||| ||| ||||| | | ||||| ||||| ||||| |||||| Sbjct 430 GCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCGGA 371 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || |||||||| || || | | || | ||||||||| ||||| || Sbjct 370 AAGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGGGG 311 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| || ||||| | || | ||||| | | || || Sbjct 310 AATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAAC 251 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||||| || || |||||||| || || || ||||| Sbjct 250 TTCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 203 >seq34430 Length=319 Score = 89.7 bits (98), Expect = 5e-13 Identities = 161/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | ||||| ||| ||||| | | ||||| || || ||||| || || Sbjct 309 GCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGA 250 Query 138447 CATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | ||| | || | || |||||||| || |||| | | || | |||||| || || || | Sbjct 249 AAGAGTCCTGCCA-TCTTCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGGG 191 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || ||||||||||| ||| || ||||| | || | ||||| | | || | Sbjct 190 GAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAA 131 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 | |||| || | ||||| || || |||||||| || || || |||||| || Sbjct 130 CTTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCATGCCT 78 >seq61286 Length=444 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518 ||||||||| |||||||||| |||| | | ||| || || || || ||||||||||| Sbjct 9 GTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCTTCTTT 68 Query 138519 GTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577 ||| ||| |||| | ||| | | ||| | ||||| | | ||| ||||| | || | Sbjct 69 GTC-CTGAATTTTGGCTTTGACATTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGA 127 Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| || || || || || ||||||||||| Sbjct 128 TGGTTTTACCCGTGAGCGTCTTGACGAAAATCTGCAT 164 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | || || || ||||||||||| || | || || ||| Sbjct 180 CAATACCAAATGCAACGTGGATTCTTTCTGAATGTTGTAATCAGAAAGCGTGCGGCCGTC 239 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||||| |||||||||| | |||| | | ||| || || || || || ||||| || || Sbjct 240 CTCGAGCTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTATC 299 Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| |||| | ||| | | || | ||||| | || ||| || || | ||| | | Sbjct 300 -CTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGG 358 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || || |||| ||||| || ||||||||||| Sbjct 359 TCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 392 >seq6525 Length=1586562 Score = 82.4 bits (90), Expect = 8e-11 Identities = 183/270 (68%), Gaps = 10/270 (4%) Strand=Plus/Minus Query 22606 GTACGGATAGTCAAAGTCCTGTTCGACGCCACCCATGCGCATGATTTCCTCGTATGCCGT 22665 |||||||||||| | ||| | |||| ||| |||| || ||| || ||| || || Sbjct 115808 GTACGGATAGTCCGACTCCAGCTCGAGGCCGCCCAGCTGCTCGATCGCCCGGTACGC-GT 115750 Query 22666 ATGTATG--AGACCGCCGTCACAGCCCATGTCGACATGGTCGCAATCGACCAGCTGCTGC 22723 ||| | || |||||| ||||| ||| | || |||||| || ||||||| ||| Sbjct 115749 -TGTCGGGCAGGCCGCCGCTGCAGCCTTCGTCAAGATCGTCGCAGTCCACCAGCTCCTGT 115691 Query 22724 TCCGACAAATCGATAAGGCGATCGTACTTGATCGCGTACTGACTCTCGAGCGCGCCCAGA 22783 || |||| | || | ||| ||||||||||||||| | ||||| |||| Sbjct 115690 TCGGACAGGGACAGCAGCTGGCCGTGCTTGATCGCGTACTGGCCCTCGACGTTGCCCGTC 115631 Query 22784 CCGGCAAAAGCCCAACAGGCGCCGCACATGCCCTGATCTTTCACCGACGT---GACTTTG 22840 | | || ||||| || | ||||| ||||||||| ||||||| || ||| || Sbjct 115630 ACCGAGAAGGCCCAGCACGAACCGCATCCGCCCTGATCCTTCACCGGAGTCACGACGTTC 115571 Query 22841 TTGAGGGTGCGCCAATCGAAGCTGGTCGGC 22870 || | ||||| |||||||||| |||| Sbjct 115570 TTCTG---TCGCCAGTCGAAGCTGGACGGC 115544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495779859255360