Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq6476 154 1e-32 seq34431 125 5e-24 seq34430 107 1e-18 seq6559 100 2e-16 seq61987 91.5 1e-13 seq24285 86.0 4e-12 seq61286 82.4 5e-11 >seq6476 Length=10381176 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 ||| || || | || ||||||||| || || ||||| |||||||| |||||||||||| Sbjct 5657361 GCCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCGGA 5657302 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || |||| ||||||| | || ||||||||| | |||||||||||||| || ||| Sbjct 5657301 AAGGGTTCTGCCGTCTTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGTGG 5657242 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||||||||| ||||| |||||| || || ||||||| || || ||| || Sbjct 5657241 AATTCCTTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATTGTGTCAGAGGCTTCAAC 5657182 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||| |||||||| || || |||||||| || || |||||||| Sbjct 5657181 TTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 5657134 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 14964 TAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTC 15023 || ||| | |||||| ||||| || || || ||||||||||| ||| |||| | || Sbjct 5656890 TAGAACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTTCTGCCATC 5656831 Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083 |||| ||| |||||||| | |||||||| ||||| || ||||| ||||| ||||| Sbjct 5656830 CTCTAGTTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTGTC 5656771 Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 || || ||| ||| | |||||||| || | ||| || || | ||| ||||| Sbjct 5656770 CTGGATCTTAGCTTTGACATTCTCTATAGTGTCAGAAGCTTCCACCTCGAGGGTGATGGT 5656711 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || || |||||||| || || |||||||| Sbjct 5656710 TTTTCCAGTAAGAGTTTTCACGAAGATTTGCAT 5656678 >seq34431 Length=440 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||| ||||| | | | ||| ||||| || ||||| |||||||| ||||| || ||| Sbjct 431 TGCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCGG 372 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| |||| | ||||| | ||| ||||||||| | |||||||||||||| || | Sbjct 371 AAAGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGGG 312 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||| ||||| || ||| |||||| | || || || || ||| | Sbjct 311 GAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAA 252 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | || |||||||| || || |||||||| || || |||||||| Sbjct 251 CTTCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 203 >seq34430 Length=319 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||| ||||| | | | ||| ||||| || ||||| ||||| || ||||| ||||| Sbjct 310 TGCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTG 251 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | || | ||||| | ||| ||||| || | ||||||||||| || || | Sbjct 250 AAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGGG 191 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||| ||||| || ||| |||||| | || || || || ||| | Sbjct 190 GAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAA 131 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| |||||||| || || |||||||| || || |||||||| Sbjct 130 CTTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 82 >seq6559 Length=1815223 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | ||| ||||||||||| | || || ||||| || ||||| ||||| | Sbjct 1625110 CCACCGCGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAG 1625051 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || | |||||| || || | ||||| | || || || || Sbjct 1625050 AGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGG 1624991 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||||||| ||| ||| | || || || || || || Sbjct 1624990 ATTCCTTCCTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACT 1624931 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || ||||||| ||| || || |||||||||||| Sbjct 1624930 TCCAACGTGATGGTCTTTCCTGTCAAAGTCTTGACGAAAATTTGCATA 1624883 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | ||| ||||| ||||| | || || |||||||| ||||||||||| Sbjct 1625338 CCACCACGAAGTCTCAAAACCAAATGCAACGTGGATTCTTTTTGAATGTTGTAATCAGAA 1625279 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | ||||| || ||| | ||||| | ||| || || || Sbjct 1625278 AGCGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGG 1625219 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||||||| ||| || | || || || || || || Sbjct 1625218 ATTCCTTCCTTATCCTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGATGCCTCAACC 1625159 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || |||||||| ||||| | ||||| || |||||||||||| Sbjct 1625158 TCCAGTGTGATGGTTTTTCCTGTTAAGGTTTTAACGAAAATTTGCATA 1625111 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || || | ||| ||||| | ||| ||||| || || || || |||||||| || Sbjct 1625566 CCTCCGCGAAGTCTCAAAACAAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAC 1625507 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | ||||| || ||| | ||||| | ||| || || || Sbjct 1625506 AGTGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGG 1625447 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||||||| ||| ||| |||| || || || | || || Sbjct 1625446 ATACCTTCCTTGTCCTGAATTTTGGCTTTGACATTTTCGATTGTGTCCGAAGCCTCAACC 1625387 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || ||||||||||| || || || || || ||||| |||||| Sbjct 1625386 TCCAGTGTGATGGTTTTACCCGTGAGCGTCTTGACGAAAATCTGCATA 1625339 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| || | ||| ||||| || || || || || || || ||||| || || Sbjct 1624654 CCACCACGCAGTCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTC--TG 1624597 Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || | | | |||| || | || || |||||| | ||||||||||| || || | Sbjct 1624596 ACAAGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCG 1624537 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || ||||| || || ||| || ||| ||| | || || || || | ||| | Sbjct 1624536 GGATGCCTTCTTTATCCTGAATCTTCGCTTTGACATTCTCAATCGTGTCCGAAGCTTCGA 1624477 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || || || || || || ||||||| |||||| || || || ||||| Sbjct 1624476 CCTCCAAAGTGATAGTCTTTCCTGTCAAAGTTTTAACGAAGATCTGCAT 1624428 >seq61987 Length=372 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | ||| ||||||||||| | || || ||||| || ||||| ||||| | Sbjct 62 CCACCGCGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAG 121 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || | |||||| || || | ||||| | || || || || Sbjct 122 AGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGG 181 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||||||| ||| ||| | || || || || || || Sbjct 182 ATTCCTTCCTTATCCTGAATTTTGGCTTTGACATTCTCGATCGTGTCAGACGCCTCAACT 241 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || ||||||| ||||| || ||||| |||||| Sbjct 242 TCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCATA 289 >seq24285 Length=372 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| || | ||| ||||| || || || || || || || ||||| ||| Sbjct 313 CCACCACGCAGTCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGAC 254 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | | || || | || || |||||| | ||||||||||| || || || Sbjct 253 AGGGTACGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGGG 194 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| || || ||| || ||| ||| | || || || || | ||| || Sbjct 193 ATGCCTTCTTTATCCTGAATCTTCGCTTTGACATTCTCAATCGTGTCCGAAGCTTCAACC 134 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || |||||||| ||||| || || || ||||| Sbjct 133 TCCAAAGTGATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 87 >seq61286 Length=444 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | ||| || || ||||| | || || ||||| || ||||||||||| Sbjct 166 CCACCACGAAGTCTCAATACCAAATGCAACGTGGATTCTTTCTGAATGTTGTAATCAGAA 225 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | ||||| || || | ||||| | ||| || || || Sbjct 226 AGCGTGCGGCCGTCCTCGAGCTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGGGGG 285 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||||||| ||| || | || || || || || || Sbjct 286 ATTCCTTCCTTATCCTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGACGCCTCAACT 345 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || ||||||| ||||| || ||||| |||||| Sbjct 346 TCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCATA 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357053177641580