Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq34431 134 1e-26 seq6476 125 6e-24 seq34430 113 4e-20 seq6559 109 5e-19 seq24285 95.1 1e-14 seq6487 84.2 2e-11 >seq34431 Length=440 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | || || | ||| ||||| || || |||||||| ||||| ||| Sbjct 432 ATGCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCG 373 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || ||| || | ||| || || ||| | ||||| || || || ||||| Sbjct 372 GAAAGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGG 313 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||||||||| ||||| || || ||| | || | || | ||||| || | || Sbjct 312 GGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTA-CGTTCTCAATTGTGTCAGAGGCTTC 254 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||||| | ||||||||||| |||||||| || || |||||||| Sbjct 253 AACTTCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 203 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| || || | || || || || || || ||||||||||| || |||||||| Sbjct 204 ATTCCTCCTCGAAGACGCAGAACCAGGTGAAGTGTAGATTCCTTTTGAATGTTATAATCT 145 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || | ||| || || || | |||| || || || ||||| Sbjct 144 GAAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGG 85 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||||||||| ||||| || || ||| | || | || | ||||| || | || Sbjct 84 GGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTA-CGTTCTCGATTGTGTCAGATGCTTC 26 Query 45290 GACTTCGAGAGTAACCGTTTTGCCG 45314 |||||||| || | ||||||||| Sbjct 25 AACTTCGAGGGTGATGGTTTTGCCG 1 >seq6476 Length=10381176 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 |||||||| || | || |||| || || || ||||| |||||||| || |||||| Sbjct 5657360 CCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCGGAA 5657301 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | |||| | || |||| || || || ||| | ||||| || || || ||||| ||| Sbjct 5657300 AGGGTTCTGCCGTCTTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGTGGA 5657241 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || |||||||| || || ||||| || | ||||| ||||| || | || ||| Sbjct 5657240 ATTCCTTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATTGTGTCAGAGGCTTCAACT 5657181 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | ||||||||||| |||||||| || || |||||||| Sbjct 5657180 TCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 5657134 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | || || | ||| ||||| || || || ||||| |||||||| Sbjct 5657135 ATGCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCT 5657076 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || | ||| || || || | |||| || ||||| ||||| Sbjct 5657075 GAAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGG 5657016 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||||||||| ||||| || || ||| | || | || | ||||| || | || Sbjct 5657015 GGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTA-CGTTCTCGATTGTGTCAGAGGCTTC 5656957 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | |||||||| || |||||||| ||||| |||||||| Sbjct 5656956 AACTTCGAGGGTGATGGTTTTGCCAGTGAGAGTTTTCACAAAGATTTGCAT 5656906 >seq34430 Length=319 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | || || | ||| ||||| || || || ||||| |||||||| Sbjct 311 ATGCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCT 252 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || | ||| || || || | ||||| || ||||| || || Sbjct 251 GAAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGG 192 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||||||||| ||||| || || ||| | || | || | ||||| || | || Sbjct 191 GGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTA-CGTTCTCAATTGTGTCAGAGGCTTC 133 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | ||||||||||| |||||||| || || |||||||| Sbjct 132 AACTTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 82 >seq6559 Length=1815223 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || ||||| |||| ||||| || ||||| || || || |||||||| Sbjct 1625113 ATACCACCGCGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCA 1625054 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | ||| || | ||||||||| || | ||||| | |||||| || || Sbjct 1625053 GAGAGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGG 1624994 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || ||||||||||| ||||| || | ||||| || | ||| Sbjct 1624993 GGGATTCCTTCCTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCA 1624934 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | || | || || || || | ||| || || ||||||||||| Sbjct 1624933 ACTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 1624884 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| ||||| || | | || | ||| || || |||||||| |||||||| || ||| Sbjct 1624429 ATTCCACCGCGCAGGCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCG 1624370 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || || | || ||||| ||| | ||||| || ||||| || ||| Sbjct 1624369 GACAGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGC 1624310 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| || || ||||| ||| || | || | || | ||||||||||| ||| Sbjct 1624309 GGGATTCCTTCCTTGTCCTGAATCTTTGCCTTCA-CGTTCTCGATGGTGTCGGAAGCCTC 1624251 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | || || || |||| || || || || || ||||| Sbjct 1624250 AACTTCAAGAGTTATGGTCTTCCCAGTTAACGTCTTCACGAATATCTGCAT 1624200 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188 ||| | ||||| || |||||||| || ||||| || || || || | || ||| Sbjct 1624865 CACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAGTCA--GAAAGTGTGCGACCATCC 1624808 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 || | |||||||| || | ||||||| || |||||||| |||||||||||||| || Sbjct 1624807 TCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGGTCCGGTGGAATGCCTTCTTTGTCC 1624748 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 ||||||||| ||||| || | ||||| |||| || || || | ||| | || Sbjct 1624747 TGAATTTTTGCTTTGACATTCTCGATTGTGTCCGAAGCTTCAACCTCCAAAGTGATGGTC 1624688 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || ||||| || || || ||||| Sbjct 1624687 TTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 1624656 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || ||||| || | ||||| ||| ||||| ||||| || || ||||| Sbjct 1625341 ATACCACCACGAAGTCTCAAAACCAAATGCAACGTGGATTCTTTTTGAATGTTGTAATCA 1625282 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || || || | ||||| || ||| | ||||||| ||||| || || Sbjct 1625281 GAAAGCGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGG 1625222 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| ||||| |||||||| ||||| || | || | ||||| || | ||| Sbjct 1625221 GGGATTCCTTCCTTATCCTGAATTTTGGCTTTGA-CGTTCTCGATCGTGTCAGATGCCTC 1625163 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||||| || |||| ||||| || ||||||||||| Sbjct 1625162 AACCTCCAGTGTGATGGTTTTTCCTGTTAAGGTTTTAACGAAAATTTGCAT 1625112 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | | || | ||| || || |||||||| |||||||| || || Sbjct 1624657 ATTCCACCACGCAGTCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTC- 1624599 Query 45171 CTGAC--GGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| ||| || || | || ||||| ||| | ||||| || ||||| || | Sbjct 1624598 -TGACAAGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAG 1624540 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 |||| |||||||||||||| ||||| || ||||| || | ||||| |||| | Sbjct 1624539 GCGGGATGCCTTCTTTATCCTGAATCTTCGCTTTGACATTCTCAATCGTGTCCGAAGCTT 1624480 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||| || | ||| | || || || || | |||||| || || || ||||| Sbjct 1624479 CGACCTCCAAAGTGATAGTCTTTCCTGTCAAAGTTTTAACGAAGATCTGCAT 1624428 >seq24285 Length=372 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | | || | ||| || || |||||||| |||||||| || ||| Sbjct 316 ATTCCACCACGCAGTCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCG 257 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || ||||| ||| | ||||| || ||||| || ||| Sbjct 256 GACAGGGTACGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGC 197 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || |||||||||||||| ||||| || ||||| || | ||||| |||| || Sbjct 196 GGGATGCCTTCTTTATCCTGAATCTTCGCTTTGACATTCTCAATCGTGTCCGAAGCTTCA 137 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||| | || || || || || ||||| || || || ||||| Sbjct 136 ACCTCCAAAGTGATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 87 >seq6487 Length=3923646 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 124107 CAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACT-GGAGCGTTTTAAAACA 124165 ||||||||||||||||| | | ||||| ||| ||||||| | ||| || || | Sbjct 1174964 CAGTACGACATGTGGAACGTCAAGCCGACGAATCTGTGGGATTGGGATGAATTGAAGGCG 1174905 Query 124166 ACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAAC 124225 | | || ||| ||||| | | |||||||| || | || ||||| ||||| | Sbjct 1174904 AAG-ATCGCGAAACACGGAGTAAGGAACTCGCTTTTAATAGCACCTATGCCAACGGCCTC 1174846 Query 124226 CACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGT 124285 || || || |||||||| || |||||||| ||||||||| ||| | ||| | ||||| Sbjct 1174845 GACGGCGCAGATTTTAGGGAATAACGAATCGATCGAGCCGTACACAAGCAACATCTACGT 1174786 Query 124286 GCGACGAGTGTTAGCCGGCGATTTT 124310 | || ||| | |||| || ||| Sbjct 1174785 AAGGCGCGTGCTGTCCGGAGAATTT 1174761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451563694688480