Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_013059.1 Length=40975 Score E Sequences producing significant alignments: (Bits) Value seq42077 152 1e-32 >seq42077 Length=1008 Score = 152 bits (168), Expect = 1e-32 Identities = 262/378 (69%), Gaps = 2/378 (1%) Strand=Plus/Plus Query 22563 TCGAACCAGAACACAACTGGCTTTTCGATTACTTCAACCAGGCCAAAGCGCTCAGCGGTG 22622 || ||||| || || ||||| || | |||||||| ||||| ||||||||||| ||| Sbjct 209 TCAAACCAAAAAACGACTGGGGCATCCTTCACTTCAACAAGGCCGAAGCGCTCAGCAGTG 268 Query 22623 CGGAAGTTAACGCTACTCCTGCGCCCCCGCTCAACCTGCAGGGAGACCTGTTTTCTGAAC 22682 ||||| || ||||| | | ||| | ||||| |||| | | || | | |||| Sbjct 269 CGGAAATTGACGCTGTACTTCCGCGCGCGCTCCGCCTGGGCTGCTATCTCCTCGCGGAAC 328 Query 22683 ATCTCCAGCGAATATGTCGTTTTCAGCAAATTGCACGGCGCACAGGACGGGAAGATGTTT 22742 || || || | || ||||| | || ||||| |||||||| | |||| || ||| Sbjct 329 ATTTCTAGGCTGAAGGTAGTTTTGAACAGGTTGCATGGCGCACACGCCGGGTTGAGGTTC 388 Query 22743 TCCGGACAGTCA-GCTTCTGGTCTGAACACTTCACCGGTAGTTTTCAGTCTGAAAATGCC 22801 || ||||| | || | || | ||| ||||| | ||||||| |||| | ||| Sbjct 389 TCTATGCAGTCGCGGTTTTCGTGCCAGACCTTG-CCGGTGGCTTTCAGTTTGAATAAGCC 447 Query 22802 TTTCGCAGCAGCCTTCATACACTGCTCAGATTTTCGCAGCACCGCCTCAACGTGGTCAGC 22861 ||| || ||| ||| |||||| |||| |||| ||||| || |||||||| || Sbjct 448 TTTGGCTTTCGCCGCCATGTCCTGCTCGGATTCACGCATCACCGGTTCGACGTGGTCGGC 507 Query 22862 ATGCCAGCCCTTCTCCGGTAGCACACAGCCACAGTAAGCGCAGCGGCCGCCAAACTTCAT 22921 |||||||| || || || || || || ||||||||||| ||||||||||||||| Sbjct 508 GTGCCAGCCTTTTTCTGGCAGTTTGCAACCGCAGTAAGCGCACCGGCCGCCAAACTTCTC 567 Query 22922 GCGTAGCTCTGCGCGTTG 22939 || | |||||||| || Sbjct 568 CCGCAATTCTGCGCGCTG 585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130877392520472