Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq24285 134 2e-26 seq6559 127 2e-24 seq34431 122 1e-22 seq34430 111 2e-19 seq6476 111 2e-19 seq8074 107 2e-18 >seq24285 Length=372 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||||||||| || || ||| | || ||||||||||| || ||||| Sbjct 277 TCCTTCTGGATATTGTAGTCGGACAGGGTACGCCCATCCTCGAGCTGCTTTCCAGCGAAG 218 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| |||||||| || | ||| | || || || ||| |||||| |||| || Sbjct 217 ATCAAACGCTGCTGATCAGGCGGGATGCCTTCTTTATCCTGAATCTTCGCTTTGACATTC 158 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| | ||| || |||| |||||||| || || ||||| |||||||| Sbjct 157 TCAATCGTGTCCGAAGCTTCAACCTCCAAAGTGATGGTCTTTCCTGTCAGGGTTTTAACG 98 Query 46583 AAGATTTGCATT 46594 ||||| |||||| Sbjct 97 AAGATCTGCATT 86 >seq6559 Length=1815223 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || | |||||| | ||||| |||||| ||| ||||| || ||||||||||| || Sbjct 1624882 CCACCACGTAAACGGAGCACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAA 1624823 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || |||||||| || ||||| || ||||| | ||| ||||| | || Sbjct 1624822 AGTGTGCGACCATCCTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGGTCCGGTGGA 1624763 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTC-TTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || || |||||| ||| || | | |||| || | | ||||| | ||| || Sbjct 1624762 ATGCCTTCTTTGTCC-TGAATTTTTGCTTTGACATTCTCGATTGTGTCCGAAGCTTCAAC 1624704 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||| |||||||| || || ||||| |||||||| ||||| |||||| Sbjct 1624703 CTCCAAAGTGATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCATT 1624655 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| |||||||||||||| || | |||||| |||| ||||||||||| || ||||| Sbjct 1624618 TCCTTCTGGATATTGTAGTCTGACAAGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAAG 1624559 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| |||||||| || | ||| | || || || ||| |||||| |||| || Sbjct 1624558 ATCAAACGCTGCTGATCAGGCGGGATGCCTTCTTTATCCTGAATCTTCGCTTTGACATTC 1624499 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| | ||| || |||| ||||| || || || |||| |||||||| Sbjct 1624498 TCAATCGTGTCCGAAGCTTCGACCTCCAAAGTGATAGTCTTTCCTGTCAAAGTTTTAACG 1624439 Query 46583 AAGATTTGCATT 46594 ||||| |||||| Sbjct 1624438 AAGATCTGCATT 1624427 Score = 105 bits (116), Expect = 8e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||||||||| || ||||| |||| ||||||||||| || ||||| Sbjct 1624390 TCCTTCTGGATATTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAG 1624331 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| |||||||| || | ||| | | ||||||||| ||||| ||| | || Sbjct 1624330 ATCAAACGCTGCTGATCAGGCGGGATTCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTC 1624271 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| | || || || | || ||||| || || || | ||| || || Sbjct 1624270 TCGATGGTGTCGGAAGCCTCAACTTCAAGAGTTATGGTCTTCCCAGTTAACGTCTTCACG 1624211 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 1624210 AATATCTGCAT 1624200 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 ||| |||| |||||| || || ||||| || ||||| || || || ||||| |||| Sbjct 1625324 CAAAACCAAATGCAACGTGGATTCTTTTTGAATGTTGTAATCAGAAAGCGTGCGGCCGTC 1625265 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||||||| || |||||||| ||||| | |||||| || | || | | ||||| || Sbjct 1625264 CTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTATC 1625205 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560 | || || |||| || | | |||||| | || || |||| |||||||| Sbjct 1625204 CTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGATGCCTCAACCTCCAGTGTGATGGT 1625145 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || | |||||||| || |||||||| Sbjct 1625144 TTTTCCTGTTAAGGTTTTAACGAAAATTTGCAT 1625112 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 ||| || ||||||| || ||||| || || |||||||| || || ||||| |||| Sbjct 1625552 CAAAACAAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGTGTGCGGCCGTC 1625493 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||||||| || |||||||| ||||| | |||||| || | || | | |||||||| Sbjct 1625492 CTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCTTCCTTGTC 1625433 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560 | || || |||| | | | ||||| | || || |||| |||||||| Sbjct 1625432 CTGAATTTTGGCTTTGACATTTTCGATTGTGTCCGAAGCCTCAACCTCCAGTGTGATGGT 1625373 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| ||||| || || || || ||||| Sbjct 1625372 TTTACCCGTGAGCGTCTTGACGAAAATCTGCAT 1625340 >seq34431 Length=440 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||||| |||| ||| | ||| ||| |||||||| || ||||||| Sbjct 431 TGCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCGG 372 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| | | || ||||| |||||||| ||||| ||||| ||||| || || | | Sbjct 371 AAAGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGGG 312 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || || ||||| |||||| || | || | | ||||| | ||| | Sbjct 311 GAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAA 252 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 | || | |||||||||||||| || || ||||| || |||||||||||| Sbjct 251 CTTCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCATT 202 >seq34430 Length=319 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||||| |||| ||| | ||| ||| || ||||| || || || | Sbjct 310 TGCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTG 251 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| | | || ||||| ||||||||||| || ||||| |||||||| || | | Sbjct 250 AAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGGG 191 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || || ||||| |||||| || | || | | ||||| | ||| | Sbjct 190 GAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAA 131 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||||||||| || || ||||| || ||||||||||| Sbjct 130 CTTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 82 >seq6476 Length=10381176 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||||| |||| ||| | ||| ||| || ||||| || || || | Sbjct 5657134 TGCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTG 5657075 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| | | || ||||| ||||||||||| || |||| |||||||| || | | Sbjct 5657074 AAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGGG 5657015 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || || ||||| |||||| || | || | | ||||| | ||| | Sbjct 5657014 GAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGAGGCTTCAA 5656955 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||||||||| || || ||||| |||||||||||||| Sbjct 5656954 CTTCGAGGGTGATGGTTTTGCCAGTGAGAGTTTTCACAAAGATTTGCAT 5656906 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||| ||||| ||||| || || | |||| || ||||||||||| ||||| Sbjct 5657324 TCTTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCGTCTTCCAGCTGCTTGCCAGCGAAA 5657265 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||| || || | || | | || |||||| ||| || ||| | | Sbjct 5657264 ATCAAACGCTGTTGATCCGGTGGAATTCCTTCTTTGTCCTGGATTTTGGCCTTCACGTTT 5657205 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| | ||| || || | |||||||||||||| || || ||||| || Sbjct 5657204 TCTATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACG 5657145 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 5657144 AAGATTTGCAT 5657134 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | |||||||| | ||| ||||| ||||| ||||| || || Sbjct 5656904 CCTCCGCGAAGACGTAGAACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGAA 5656845 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | | || || || |||||||| || || ||||| || || || || | || Sbjct 5656844 AGAGTTCTGCCATCCTCTAGTTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGA 5656785 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | || |||||| |||||| |||| || | | ||||| | |||||| Sbjct 5656784 ATACCTTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATAGTGTCAGAAGCTTCCACC 5656725 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||||||||| || || || ||||| || ||||||||||| Sbjct 5656724 TCGAGGGTGATGGTTTTTCCAGTAAGAGTTTTCACGAAGATTTGCAT 5656678 >seq8074 Length=2046595 Score = 107 bits (118), Expect = 2e-18 Identities = 144/199 (72%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 46396 TGTACTCTCCTTT-TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGC 46454 ||| | | ||||| ||||||||||| ||||| ||||| || |||| || ||||| |||| Sbjct 637385 TGTCCGCACCTTTCTGGATATTGTAATCGGAAAGAGTACGTCCGTCCTCCAGCTGTTTGC 637326 Query 46455 CGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCT 46514 ||||||| || | ||||| || || | ||| | | |||||||||| |||||| || Sbjct 637325 CGGCGAAGATGAGTCGCTGTTGATCCGGCGGAATTCCCTCCTTGTCCTGTATCTTCGCCT 637266 Query 46515 TGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCG 46574 ||| || | | || ||| | || || || | |||||||| || ||||| || | Sbjct 637265 TGACATTCTCGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTCTTACCCGTGAGGG 637206 Query 46575 TTTTAACAAAGATTTGCAT 46593 | || || ||||| ||||| Sbjct 637205 TCTTCACGAAGATCTGCAT 637187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564688790441760