Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6476 150 2e-31 seq34431 147 2e-30 seq34430 127 2e-24 seq8074 125 7e-24 seq6559 111 2e-19 seq61286 89.7 5e-13 seq8374 89.7 5e-13 >seq6476 Length=10381176 Score = 150 bits (166), Expect = 2e-31 Identities = 161/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| ||||| ||||||||||||||| |||| || || ||| | Sbjct 5657134 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 5657193 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||||| | || | ||||||| |||||||| |||||||| | || || Sbjct 5657194 GACACAATAGAAAACG-TGAAGGCCAAAATCCAGGACAAAGAAGGAATTCCACCGGATCA 5657252 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | |||| ||| ||||| |||||||| |||| | ||||| ||| ||||| Sbjct 5657253 ACAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAAGACGGCAGAACCCTTTCCGATTACAA 5657312 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||||||||| ||| | || || || || || Sbjct 5657313 CATCCAAAAAGAATCTACACTCCACTTAGT 5657342 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| ||||| ||||||||||||||| |||| || || ||| | Sbjct 5656906 ATGCAAATCTTTGTGAAAACTCTCACTGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 5656965 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | |||| || |||| |||||||| || |||||| | || || Sbjct 5656966 GACACAATCGAGAACG-TAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCA 5657024 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| || ||||| || || || || | | || || || || || Sbjct 5657025 GCAGCGTCTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAA 5657084 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || || | ||||| |||||||| |||||| | |||| ||| Sbjct 5657085 CATCCAGAAAGAGTCTACGCTCCATTTGGTTCTGCGTCTTCGAGGAGGC 5657133 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || || |||||||||||| |||| || || || | Sbjct 5656678 ATGCAAATCTTCGTGAAAACTCTTACTGGAAAAACCATCACCCTCGAGGTGGAAGCTTCT 5656737 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| || |||| |||||||| || ||||| | || ||| Sbjct 5656738 GACACTATAGAGAATGTCAAAGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGATCAA 5656797 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | || ||||| || || || || | | || || || |||||| Sbjct 5656798 CAACGTTTGATCTTTGCTGGCAAGCAACTAGAGGATGGCAGAACTCTTTCTGATTACAAC 5656857 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | ||||| ||| |||| || ||| Sbjct 5656858 ATCCAGAAGGAATCTACGCTTCATCTGGTTCTACGT 5656893 >seq34431 Length=440 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| ||||| ||||| ||||| |||||||||||||| |||| || || ||| | Sbjct 202 AATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACTCTCGAAGTTGAAGCCTC 261 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| || |||| | |||| || |||| |||||||| || |||||| | || | Sbjct 262 TGACACAATTGAGAACG-TAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATC 320 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | |||| ||| ||||| || || || || | | || || |||||| | Sbjct 321 AACAGCGTTTGATTTTCGCTGGCAAGCAACTCGAAGATGGTAGAACTCTTTCCGACTATA 380 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| || | ||||| |||||||| |||||| | |||| ||| Sbjct 381 ACATCCAAAAAGAGTCTACGCTCCATTTGGTTCTGCGTCTTCGAGGAGGC 430 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 38271 GGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGT-GCAAACGCTTAAAGAAAA 38329 ||||||||||||||| |||| || || || | |||| | | |||| | |||| || Sbjct 2 GGCAAAACCATCACCCTCGAAGTTGAAGCATCTGACACAATCGAGAACG-TAAAAGCCAA 60 Query 38330 AATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACA 38389 |||| |||||||| || |||||| | || |||||||| || |||| || ||||| || Sbjct 61 GATCCAAGACAAAGAAGGCATTCCCCCGGATCAACAGCGTCTGATTTTTGCCGGCAAGCA 120 Query 38390 GCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTT 38449 || || || | | || || || || ||||| ||||||||| | || || || | Sbjct 121 ACTCGAAGATGGCAGGACTCTTTCAGATTATAACATTCAAAAGGAATCTACACTTCACCT 180 Query 38450 GGTGCTGCGTTTGAGAGGCGG 38470 ||| |||||| | |||| || Sbjct 181 GGTTCTGCGTCTTCGAGGAGG 201 >seq34430 Length=319 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| ||||| ||||||||||||||| |||| || || ||| | Sbjct 82 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 141 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || |||| | |||| || |||| |||||||| || |||||| | || || Sbjct 142 GACACAATTGAGAACG-TAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCA 200 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | |||| || ||||| || || || || | | || || || || || Sbjct 201 GCAGCGTTTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAA 260 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || || | ||||| |||||||| |||||| | |||| ||| Sbjct 261 CATCCAGAAAGAGTCTACGCTCCATTTGGTTCTGCGTCTTCGAGGAGGC 309 >seq8074 Length=2046595 Score = 125 bits (138), Expect = 7e-24 Identities = 143/191 (75%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || ||||||||| |||| || |||||| || Sbjct 637187 ATGCAGATCTTCGTGAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTAGAGGCCTCC 637246 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || || | ||||| ||||||||||| | || ||| Sbjct 637247 GATACCATCGAGAATGTCAAGGCGAAGATACAGGACAAGGAGGGAATTCCGCCGGATCAA 637306 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| |||||||||||||| |||| || || || ||| ||||| Sbjct 637307 CAGCGACTCATCTTCGCCGGCAAACAGCTGGAGGACGGACGTACTCTTTCCGATTACAAT 637366 Query 38424 ATCCA-AAAGG 38433 ||||| ||||| Sbjct 637367 ATCCAGAAAGG 637377 >seq6559 Length=1815223 Score = 111 bits (122), Expect = 2e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| ||||| || || || || |||||||| | || || || || | Sbjct 1624655 AATGCAGATCTTCGTTAAAACCCTGACAGGAAAGACCATCACTTTGGAGGTTGAAGCTTC 1624714 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | |||| |||||| | |||||||| || ||||| | ||||| Sbjct 1624715 GGACACAATCGAGAATGTCAAAGCAAAAATTCAGGACAAAGAAGGCATTCCACCGGACCA 1624774 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| | | || | || || |||||||| || || | ||||| || |||||||| Sbjct 1624775 ACAGAGATTGATCTTTGCCGGAAAACAGCTCGAGGATGGTCGCACACTTTCTGACTACAA 1624834 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461 || || |||||| | || ||||||||||||| ||||| Sbjct 1624835 TATTCAGAAGGAATCTACTTTGCATTTGGTGCTCCGTTT 1624873 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||||||||| ||||||||||| | || || ||||| | Sbjct 1625340 ATGCAGATTTTCGTCAAGACGCTCACGGGTAAAACCATCACACTGGAGGTTGAGGCTTCG 1625399 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | |||| ||||| | ||||| || || || ||| | || || Sbjct 1625400 GACACAATCGAAAATGTCAAAGCCAAAATTCAGGACAAGGAAGGTATCCCCCCAGATCAG 1625459 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | | || | ||| || |||||||| || |||| ||||| || ||||||||| Sbjct 1625460 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACACTGTCTGACTACAAC 1625519 Query 38424 ATCCAAAAGGAAGCGACGCTGCAT 38447 || || |||||| | || |||||| Sbjct 1625520 ATTCAGAAGGAATCCACCCTGCAT 1625543 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| | || || ||||||||||| | || || ||||| | Sbjct 1625112 ATGCAAATTTTCGTTAAAACCTTAACAGGAAAAACCATCACACTGGAGGTTGAGGCATCT 1625171 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | |||| ||||| | || || || ||||| ||| | || || Sbjct 1625172 GACACGATCGAGAACG-TCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCCCCAGATCA 1625230 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | ||| || |||||||| || |||| ||||| || || ||||| Sbjct 1625231 GCAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACGCTTTCTGATTACAA 1625290 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||| ||||| ||| | ||| |||||||||| Sbjct 1625291 CATTCAAAAAGAATCCACGTTGCATTTGGT 1625320 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| | || || || |||||||| | || || ||||| | Sbjct 1625568 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCT 1625627 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | ||||| | |||||||| || || ||| | || || Sbjct 1625628 GACACGATCGAAAATGTGAAGGCGAAAATTCAGGACAAAGAAGGTATCCCCCCAGATCAG 1625687 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | | || | ||| || |||||||| || |||| ||||| || ||||||||| Sbjct 1625688 CAGAGATTGATCTTCGCTGGTAAACAGCTCGAGGACGGCCGCACACTGTCTGACTACAAC 1625747 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 || || |||||| | || |||||| |||| Sbjct 1625748 ATTCAGAAGGAATCCACCCTGCATCTGGT 1625776 >seq61286 Length=444 Score = 89.7 bits (98), Expect = 5e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||||||||| ||||||||||| | || || ||||| | Sbjct 164 ATGCAGATTTTCGTCAAGACGCTCACGGGTAAAACCATCACACTGGAGGTTGAGGCTTCG 105 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | |||| ||||| | |||||||| || || ||| | || || Sbjct 104 GACACGATCGAAAATGTCAAAGCCAAAATTCAGGACAAAGAAGGTATCCCCCCAGATCAG 45 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCAC 38407 ||| | | || | ||| || |||||||| || |||| ||||| Sbjct 44 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCAC 1 >seq8374 Length=807232 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 ||||| | || || ||||||||||| || || | || ||||||| || ||||| || Sbjct 792211 TCGTCTCGCGAGATAAGTTCGTTGCTAAAGGTGAGACCTGGCATGACTCCACGTTTCTTC 792152 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGC 133037 |||||||| || || ||||||||||| ||||| | |||||||| |||||||| || Sbjct 792151 AGCCAAAAAATCGCTGCGAAACTGCCGCTGAAGAATATACCCTCGACCGCCGCGAACGC 792093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499686456977920