Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq6476 118 4e-21 seq61987 105 3e-17 seq24285 100 1e-15 seq6559 96.9 1e-14 >seq6476 Length=10381176 Score = 118 bits (130), Expect = 4e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || || ||||| || || || || |||||| | ||| Sbjct 5657134 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 5657193 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | || ||||| || || || ||||||||||| || |||||| Sbjct 5657194 GACACAATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAAGGAATTCCACCGGATCAA 5657253 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| |||||| | || || || || ||||| || ||||| | | ||||| || Sbjct 5657254 CAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAAGACGGCAGAACCCTTTCCGATTACAAC 5657313 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | || || | ||||| |||||||| ||| |||| Sbjct 5657314 ATCCAAAAAGAATCTACACTCCACTTAGTTTTACGACT 5657351 Score = 111 bits (122), Expect = 6e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | || ||||| ||||| || ||||| ||||| || || || || || ||| | Sbjct 5656675 ATCATGCAAATCTTCGTGAAAACTCTTACTGGAAAAACCATCACCCTCGAGGTGGAAGCT 5656734 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 ||||| | || || | | ||| || || || || || ||||| |||||||| ||| Sbjct 5656735 TCTGACACTATAGAGAATGTCAAAGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGAT 5656794 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 ||||||||||| || || | || || ||||| || ||||| |||||| | | ||||| Sbjct 5656795 CAACAACGTTTGATCTTTGCTGGCAAGCAACTAGAGGATGGCAGAACTCTTTCTGATTAC 5656854 Query 391227 AATATTGATAAGGATGCAACACTTCA 391252 || || | ||||| | || ||||| Sbjct 5656855 AACATCCAGAAGGAATCTACGCTTCA 5656880 >seq61987 Length=372 Score = 105 bits (116), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| |||| || || || || || | || ||||| | ||| Sbjct 288 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCT 229 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | ||| |||||||| |||||||||||||| || || ||||| Sbjct 228 GACACGATCGAGAATGTCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCCCCAGATCAG 169 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || || | || |||||||| || ||||| | || | | |||||||| Sbjct 168 CAAAGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGTCGCACGCTCTCTGATTATAAC 109 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | || || | ||| | || ||||| || ||||| Sbjct 108 ATTCAGAAAGAATCCACATTGCATTTAGTTTTGAGACT 71 >seq24285 Length=372 Score = 100 bits (110), Expect = 1e-15 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||||||||| ||||| || || || || ||| | || |||||| | || Sbjct 86 AATGCAGATCTTCGTTAAAACCCTGACAGGAAAGACCATCACTTTGGAGGTTGAAGCTTC 145 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | | ||| || ||||| ||||| ||||| || || |||||||| Sbjct 146 GGACACGATTGAGAATGTCAAAGCGAAGATTCAGGATAAAGAAGGCATCCCGCCTGATCA 205 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| || ||| | || || || || || ||||| | || || | || || || Sbjct 206 GCAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGATGGGCGTACCCTGTCCGACTACAA 265 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || || || || || Sbjct 266 TATCCAGAAGGAATCCACTCTCCATTTGGT 295 >seq6559 Length=1815223 Score = 96.9 bits (106), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||| || || || || || | || ||||| | || Sbjct 1624884 ATGCAAATTTTCGTCAAGACTTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCA 1624943 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | ||| ||||||||||| ||||||||||| || || ||||| Sbjct 1624944 GACACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGAATCCCCCCAGATCAG 1625003 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || || | || |||||||| || ||||| | || | | |||||||| Sbjct 1625004 CAAAGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGTCGCACGCTCTCTGATTATAAC 1625063 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | || || | ||| | || ||||| || ||||| Sbjct 1625064 ATTCAGAAAGAATCCACATTGCATTTAGTTTTGAGACT 1625101 Score = 95.1 bits (104), Expect = 5e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||||||||| |||| || || ||||| ||| | || || ||| | || Sbjct 1624427 AATGCAGATCTTCGTTAAAACTTTGACAGGAAAGACTATCACTTTGGAGGTCGAAGCTTC 1624486 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | | ||| || ||||| ||||| ||||| || || |||||||| Sbjct 1624487 GGACACGATTGAGAATGTCAAAGCGAAGATTCAGGATAAAGAAGGCATCCCGCCTGATCA 1624546 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| || ||| | || || || || || || || | || ||| | || || || Sbjct 1624547 GCAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGGCGCACCTTGTCAGACTACAA 1624606 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | || || || || || Sbjct 1624607 TATCCAGAAGGAATCCACTCTCCATTTGGT 1624636 Score = 93.3 bits (102), Expect = 2e-13 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| |||| || || || || || | || ||||| | ||| Sbjct 1625796 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCT 1625855 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | || ||||||||||| || ||||| |||||||| ||||| Sbjct 1625856 GACACGATCGAAAACGTGAAGGCGAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAG 1625915 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | ||||| ||| | || ||||| || || || || | || | | ||||| || Sbjct 1625916 CAGAGGTTAATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACACTTTCTGATTACAAC 1625975 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || |||||| | ||| | |||| ||||| Sbjct 1625976 ATTCAGAAAGAGTCCACGCTTCACCTTGTACTTCGACTTAGAGG 1626019 Score = 91.5 bits (100), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||||||||| | || || ||||| || || || || ||||| ||||| Sbjct 1625112 ATGCAAATTTTCGTTAAAACCTTAACAGGAAAAACCATCACACTGGAGGTTGAGGCATCT 1625171 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | ||| |||||||| |||||||||||||| || || ||||| Sbjct 1625172 GACACGATCGAGAACGTCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCCCCAGATCAG 1625231 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | || ||||| || || || || | || | | ||||| || Sbjct 1625232 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACGCTTTCTGATTACAAC 1625291 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | || || | || | || || || || ||||| Sbjct 1625292 ATTCAAAAAGAATCCACGTTGCATTTGGTTTTGAGACT 1625329 Score = 89.7 bits (98), Expect = 2e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||||||||| ||||| || || || || ||| | || |||||| | || Sbjct 1624655 AATGCAGATCTTCGTTAAAACCCTGACAGGAAAGACCATCACTTTGGAGGTTGAAGCTTC 1624714 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || | | ||| ||||||||| || || ||||| ||||| || || || Sbjct 1624715 GGACACAATCGAGAATGTCAAAGCAAAAATTCAGGACAAAGAAGGCATTCCACCGGACCA 1624774 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | || || || | || ||||| || || ||||| | || | | || || || Sbjct 1624775 ACAGAGATTGATCTTTGCCGGAAAACAGCTCGAGGATGGTCGCACACTTTCTGACTACAA 1624834 Query 391229 TATTGATAAGGA 391240 |||| | ||||| Sbjct 1624835 TATTCAGAAGGA 1624846 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || | ||||| || || || |||||||| ||||| | || Sbjct 1624200 ATGCAGATATTCGTGAAGACGTTAACTGGGAAGACCATAACTCTTGAAGTTGAGGCTTCC 1624259 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || ||| ||||| || ||||||||||| || |||||||| Sbjct 1624260 GACACCATCGAGAACGTGAAGGCAAAGATTCAGGACAAGGAAGGAATCCCGCCTGATCAG 1624319 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || ||| | || || || || || || || | || || | || || ||| Sbjct 1624320 CAGCGTTTGATCTTCGCTGGAAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAAT 1624379 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || || || || Sbjct 1624380 ATCCAGAAGGAATCCACTCTCCATTTGGT 1624408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1973749282969104