Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq6511 107 1e-17 >seq6511 Length=3315862 Score = 107 bits (118), Expect = 1e-17 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 || || ||||| || ||||| ||||| |||||||||| ||| |||| ||| || | | Sbjct 2205960 CCATAAGCAAGCGCAGCTGCGGTTGGCTCATTAATTACACGAAGCACATTTAATCCAGAA 2206019 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || | | ||| ||| ||| ||||||| ||||| ||| |||||||| |||||||||||| Sbjct 2206020 ATCTGACCAGCATCCTTAGTCGCTTGTCGCTGTGAGTCGTTAAAATACGCTGGTACAGTA 2206079 Query 322364 ATAACTGCTTTATTAATAGGTTTTTGTAAATA 322395 ||||| || || || | || | | |||||| Sbjct 2206080 ATAACAGCATTCTTTACTGGAGTGTTTAAATA 2206111 Score = 104 bits (114), Expect = 2e-16 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 ||| |||| | |||||| | ||||| |||| ||||| || ||||| |||||||| | Sbjct 2205938 TTTATCTTCCTGTTTATCCATGCCATAAGCAAGCGCAGCTGCGGTTGGCTCATTAATTAC 2205997 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 | | ||||| | |||| ||| || ||||| ||||| ||||||| ||||| || Sbjct 2205998 ACGAAGCACATTTAATCCAGAAATCTGACCAGCATCCTTAGTCGCTTGTCGCTGTGAGTC 2206057 Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT 518314 ||||||||| || || ||||||||||| |||| ||||| Sbjct 2206058 GTTAAAATACGCTGGTACAGTAATAACAGCATTCTTTACT 2206097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3776962303206328