Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq6487 98.7 1e-15 >seq6487 Length=3923646 Score = 98.7 bits (108), Expect = 1e-15 Identities = 231/346 (67%), Gaps = 2/346 (1%) Strand=Plus/Plus Query 106303 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCT 106362 |||||||||||||||| | |||||| || || ||| | ||||||||||| Sbjct 1175486 ACCAATAGGTCTGTGTTTCCGATTAGATGTTTTCGTCTCCTCGATAGGATAAAAATTAAC 1175545 Query 106363 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA 106422 ||| |||||| || ||||| || || || ||||||| | ||| || ||| | Sbjct 1175546 GTCGATGACTTTGTCCAGATTACGAGTGACGATTTTTGTGACAGTTTTAAGCTTGTCAAA 1175605 Query 106423 ATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCA 106482 ||| ||||| || || ||||||| || | | ||||| || || || ||||| Sbjct 1175606 ATCGAAAGTTTTCGTGTCCGTATTGACAAACATGTTGACAGCGATAGACGCTAAGTTGCA 1175665 Query 106483 AACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTT 106542 ||| || ||| | | | | |||||| | || || |||||||||||| | || Sbjct 1175666 AACGGCGACCTCCCCAGGACCGGAGTACTCAACGATCTCGGTACACAAGTTGCTGCATTT 1175725 Query 106543 AATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG-TTGCACGCATCCTTGTAGAGCATGT 106601 || || || | || || || || | |||| | ||||| ||| ||||| ||||| | Sbjct 1175726 GATAGTGCCGATATGCTGATGATT-CGATTTTCGATTGCAATGATCTTTGTAAAGCATAT 1175784 Query 106602 AGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647 | || ||||| ||||| || || ||||||| || ||||||| Sbjct 1175785 AAGGTGTCCCGGTCTCTACTTGGGATCTGAGAATGGCGATCCACAC 1175830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589407132169120