Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_015296.1 Length=157061 Score E Sequences producing significant alignments: (Bits) Value seq2061 334 8e-87 seq2042 168 7e-37 >seq2061 Length=505 Score = 334 bits (370), Expect = 8e-87 Identities = 339/439 (77%), Gaps = 2/439 (0%) Strand=Plus/Plus Query 107211 TTAAGAAGCAGCAACGATGCCGCCGCCGGATTCAATTTCCGAGAACTCCATATCCGGACG 107270 ||| || || || |||||||| ||| ||| | ||| |||||| | || |||||||| Sbjct 37 TTATGACGCGGCCACGATGCCCATGCCACCTTCCACTTCGGAGAACGCAATGTCCGGACG 96 Query 107271 AACTGCAGCAAAGTCAAGATACACCCAATTGATGCTGTATTCCGGTTTCAGCCAGATACC 107330 || || || || || || || | ||| |||||||||||||| ||||||||||||||||| Sbjct 97 GACGGCTGCGAAATCGAGGTAGATCCAGTTGATGCTGTATTCTGGTTTCAGCCAGATACC 156 Query 107331 AGCGACCATCTGGTTTGCCGCAATAACGTCAGCAGTGTTGTTATCTTCGTCACACTTGAC 107390 |||| ||| ||||| || || | ||| ||| | |||||| ||||||||||| ||||| Sbjct 157 TGCGATCATTTGGTTGGCGGCTACAACCGAAGCCGGGTTGTTGTCTTCGTCACATTTGAC 216 Query 107391 TTTACCATCGTAGATCGCACCCATATTTGCCAGCTGGCGAATATAAGGACGAACAGCGTT 107450 ||||||||| ||| |||||||| ||||||||||| ||| || || ||||| Sbjct 217 CTTACCATCGACGATTGCACCCATGCCGATCAGCTGGCGAACATATGGGGTGACCGCGTT 276 Query 107451 GCTGAACAGACT-GCGAGTGAACGCATCATTGTTCTCACCAAGGTAATATTTGGCGATTG 107509 | |||||| ||| ||| || |||||||| || ||||| || ||||| ||||| || || | Sbjct 277 GGTGAACA-ACTGGCGCGTAAACGCATCGTTATTCTCGCCCAGGTAGTATTTAGCAATGG 335 Query 107510 CAGCGATGTTCTGTTCTGCCATAATAAACAGACCGCGAACATTGATACGATCGAAAGCAG 107569 ||| |||||| || ||||| ||||| ||| || || ||||| || ||||| ||| Sbjct 336 CAGAGATGTTGGTCTCAGCCATGATAAAAGTACCACGGACGTTGATGCGGTCGAACGCAC 395 Query 107570 ACGGACGAGTCAGACCAGTTTTGTCACCATACAACACGATACCTTCATTGGAGAAGGTCA 107629 || || ||||| || ||||||||||| ||||||||||| |||||| ||| |||||| | Sbjct 396 TTGGGCGGGTCAGGCCGGTTTTGTCACCGTACAACACGATGCCTTCAGTGGTGAAGGTAA 455 Query 107630 CGATGCTGTTAATCTGGTT 107648 |||||||||| |||||||| Sbjct 456 CGATGCTGTTGATCTGGTT 474 >seq2042 Length=482 Score = 168 bits (186), Expect = 7e-37 Identities = 215/296 (73%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 104902 CGGCTCTTAGGGATCATTAGAGCATCATAGAGTTTTTCACGGAAATAGTTCACGTGATCC 104961 ||||||||||| ||| | |||||| | || || || ||||| || ||||| |||||| Sbjct 187 CGGCTCTTAGGAATCTTGAGAGCACCGTACAGCTTGCTGCGGAAGTAATTCACATGATCC 246 Query 104962 ATTTCACCCAATTGATTCCCACCCCCAACAGTCGCGATCTCTGTAGCATTCTGACCTTCG 105021 |||| |||| || | || || || | || || || || || ||||| || || Sbjct 247 ATTTGGCCCAGCTGGTCACCGCCACCGATGGTGCTTATTTCGGTCGCGTTCTGTCCCTCA 306 Query 105022 CGGCGCGGCAACCAATAATCCTCTGCAATACCCATAAGATGGGCATTACCTGTTATCTTA 105081 || || |||| ||| || ||||| || |||||||| || || | | ||| || ||| Sbjct 307 CGACGTGGCATCCAGTAGTCCTCAGCGATACCCATGAGGTGAGTGTCGCCTTGTACCTTG 366 Query 105082 CCAGTGGTGCGGTCATATGCGTTGCGGTTTTTGAATTTACCCATCATCATGGTCATGTAT 105141 || || |||| ||||| | ||| || || || ||||||||||||| ||| || Sbjct 367 CCGGTCTGACGGTTATATGACAGGTTGTTCTTAAACTTGCCCATCATCATGGCCATATAC 426 Query 105142 TCTTCAGCAGATTTCTTACCGAGAGTACCGACGTCAAGATAGAATGCGCGTTTCTC 105197 |||||||| ||||||||||| | ||||||||||||| ||||||||||| ||||| Sbjct 427 TCTTCAGCGGATTTCTTACCCAACATACCGACGTCAAGGTAGAATGCGCGCTTCTC 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501978626018080