Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq8074 120 2e-22 seq6559 118 7e-22 seq61987 113 3e-20 seq6476 107 1e-18 seq61286 105 4e-18 seq24285 89.7 3e-13 seq34431 84.2 1e-11 >seq8074 Length=2046595 Score = 120 bits (132), Expect = 2e-22 Identities = 143/192 (74%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 ||||||| || || || || ||||| | ||| | || ||||||||||| ||||| || | Sbjct 637376 CTTTCTGGATATTGTAATCGGAAAGAGTACGTCCGTCCTCCAGCTGTTTGCCGGCGAAGA 637317 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | ||||| || || || |||| | ||||||||||| |||||| ||||| || Sbjct 637316 TGAGTCGCTGTTGATCCGGCGGAATTCCCTCCTTGTCCTGTATCTTCGCCTTGAC--ATT 637259 Query 34912 CT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 || || | || |||||| || |||| ||| ||||| || |||||||| |||||||| Sbjct 637258 CTCGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCAC 637199 Query 34970 AAAGATCTGCAT 34981 ||||||||||| Sbjct 637198 GAAGATCTGCAT 637187 >seq6559 Length=1815223 Score = 118 bits (130), Expect = 7e-22 Identities = 158/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||||||| || || | |||| |||||||||||||||||| || || || | || || Sbjct 1625098 CTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAGAGCGTGCGACCA 1625039 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || || |||||||||||||| || | | |||||| ||| | || | || |||||| Sbjct 1625038 TCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGGATTCCTTCCTTG 1624979 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTA 34944 || ||| || |||||| || || |||| || |||||||| || | || | Sbjct 1624978 TCTTGAATTTTGGCTTTGAC--ATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGA 1624921 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||||| || | |||||| || || || |||||| Sbjct 1624920 TGGTCTTTCCTGTCAAAGTCTTGACGAAAATTTGCATA 1624883 Score = 107 bits (118), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||||||| | || | ||| ||| ||||||||||| ||||| || || | || | Sbjct 1625554 CTCAAAACAAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGTGTGCGGCCG 1625495 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || |||||||| ||||| || || | || ||||| ||| | || | || |||||| Sbjct 1625494 TCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCTTCCTTG 1625435 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGT 34942 || ||| || |||||| || | ||||| | ||| |||||||| || | || Sbjct 1625434 TCCTGAATTTTGGCTTTGAC--AT--TTTCGATTGTGTCCGAAGCCTCAACCTCCAGTGT 1625379 Query 34943 TATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||||||| |||||||| ||||| || || ||||||||| Sbjct 1625378 GATGGTTTTACCCGTGAGCGTCTTGACGAAAATCTGCATA 1625339 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||||||||| || | ||| |||||| |||||||| || || ||||| | || | Sbjct 1625326 CTCAAAACCAAATGCAACGTGGATTCTTTTTGAATGTTGTAATCAGAAAGCGTGCGGCCG 1625267 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || |||||||| ||||| || || | || ||||| ||| | || | || ||||| Sbjct 1625266 TCCTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTA 1625207 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||| || ||||||| | |||| ||| |||||||| || | || ||| Sbjct 1625206 TCCTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGATGCCTCAACCTCCAGTGTGATG 1625147 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||||||| || | || || || || || |||||| Sbjct 1625146 GTTTTTCCTGTTAAGGTTTTAACGAAAATTTGCATA 1625111 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||| || ||||| ||||| | || |||| || ||||||||||||||||| Sbjct 1624847 TTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGACCATCCTCGAGCTGTTTTCCGGCAAA 1624788 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | || || ||||| | || | || || ||||| ||| || |||||| | Sbjct 1624787 GATCAATCTCTGTTGGTCCGGTGGAATGCCTTCTTTGTCCTGAATTTTTGCTTTGAC--A 1624730 Query 34910 TGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| | ||| || ||||| || | || ||||| ||||| || || || | Sbjct 1624729 T--TCTCGATTGTGTCCGAAGCTTCAACCTCCAAAGTGATGGTCTTTCCTGTCAGGGTTT 1624672 Query 34966 TCACAAAGATCTGCAT 34981 | || ||||||||||| Sbjct 1624671 TAACGAAGATCTGCAT 1624656 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | | ||||||||||| || | ||| ||| ||||||||||| ||||| || Sbjct 1625794 CCTCCACGAAGCCTCAAAACCAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAC 1625735 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || | || || |||||||| || || || || | || ||||| ||| | || Sbjct 1625734 AGTGTGCGGCCGTCCTCGAGCTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGGGGG 1625675 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || ||||| ||| ||| || || | | |||| ||| |||||||| Sbjct 1625674 ATACCTTCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTGTCAGACGCCTCAACT 1625615 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || ||||| ||||| || | || || || || ||||||||| Sbjct 1625614 TCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCATA 1625567 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| |||||||||||||| || || ||||| | || | || || ||||| Sbjct 1625999 GTGAAGCGTGGACTCTTTCTGAATGTTGTAATCAGAAAGTGTGCGGCCGTCCTCGAGCTG 1625940 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||| ||||| || |||| | ||||| ||| | || | || || ||||| ||| || Sbjct 1625939 TTTACCGGCGAAGATTAACCTCTGCTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTT 1625880 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 | || ||| | | |||| ||| |||||||| || | || ||||| ||||| || Sbjct 1625879 CGCCTTCACGTTTTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGT 1625820 Query 34958 GAGAGTCTTCACAAAGATCTGCATA 34982 | || || || || ||||||||| Sbjct 1625819 CAAGGTTTTGACGAAAATCTGCATA 1625795 >seq61987 Length=372 Score = 113 bits (124), Expect = 3e-20 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||||||| || || | |||| |||||||||||||||||| || || || | || || Sbjct 74 CTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAGAGCGTGCGACCA 133 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || || |||||||||||||| || | | |||||| ||| | || | || ||||| Sbjct 134 TCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGGATTCCTTCCTTA 193 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTA 34944 || ||| || |||||| || || |||| ||| |||||||| || | || | Sbjct 194 TCCTGAATTTTGGCTTTGAC--ATTCTCGATCGTGTCAGACGCCTCAACTTCCAACGTGA 251 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| ||||| || | || || || || ||||||||| Sbjct 252 TGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCATA 289 >seq6476 Length=10381176 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| |||||||| || ||||| | | |||| || || || || |||||||| Sbjct 5657096 TCTTTCTGGATGTTATAATCTGAAAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAA 5657037 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | || || ||||| ||||| ||| ||| Sbjct 5657036 ATCAGACGCTGCTGATCCGGGGGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTC 5656977 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| ||| ||||| |||| ||| |||||||| || |||||||| |||||| Sbjct 5656976 TCGATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTTTTGCCAGTGAGAGTTTTCACA 5656917 Query 34971 AAGATCTGCATA 34982 ||||| |||||| Sbjct 5656916 AAGATTTGCATA 5656905 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||| |||| || ||| ||||| ||||| || || ||||| ||| |||| || Sbjct 5656887 AACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTTCTGCCATCCTC 5656828 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || || ||||| || | ||||| || ||| | || | || || ||||| Sbjct 5656827 TAGTTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTGTCCTG 5656768 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| |||||| |||| | ||| || || || |||| ||| |||||||| Sbjct 5656767 GATCTTAGCTTTGACATTCTCTATAGTGTCAGAAGCTTCCACCTCGAGGGTGATGGTTTT 5656708 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || ||||| ||||| ||||| ||||| Sbjct 5656707 TCCAGTAAGAGTTTTCACGAAGATTTGCAT 5656678 >seq61286 Length=444 Score = 105 bits (116), Expect = 4e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||| ||||| || | ||| ||||||||||||||| || || ||||| | || | Sbjct 178 CTCAATACCAAATGCAACGTGGATTCTTTCTGAATGTTGTAATCAGAAAGCGTGCGGCCG 237 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || |||||||| |||||||| || | || ||||| ||| | || | || ||||| Sbjct 238 TCCTCGAGCTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTA 297 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||| || ||||||| | |||| ||| |||||||| || | || ||| Sbjct 298 TCCTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATG 357 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| || | || || || || ||||||||| Sbjct 358 GTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCATA 393 >seq24285 Length=372 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | ||| ||| ||||| || || ||||| || ||| | || |||| || Sbjct 296 AACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGACAGGGTACGCCCATCCTC 237 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||| || || || | || ||||| || |||| | || || || || Sbjct 236 GAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGGGATGCCTTCTTTATCCTG 177 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||||||| |||||| || || |||| || || ||||| || | || ||||| Sbjct 176 AATCTTCGCTTTGAC--ATTCTCAATCGTGTCCGAAGCTTCAACCTCCAAAGTGATGGTC 119 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || || || || || ||||||||||| Sbjct 118 TTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 87 >seq34431 Length=440 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| || ||||||||||| ||||| ||| |||| || || || || || || || Sbjct 393 TCTTTTTGGATGTTATAGTCGGAAAGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAA 334 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || || || || | || | || || ||||| ||||| ||| ||| Sbjct 333 ATCAAACGCTGTTGATCCGGGGGAATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTC 274 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| ||| ||||| |||| || |||||||| || |||||||| ||||| Sbjct 273 TCAATTGTGTCAGAGGCTTCAACTTCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTCACG 214 Query 34971 AAGATCTGCAT 34981 ||||| ||||| Sbjct 213 AAGATTTGCAT 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324325833956064