Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6511 132 4e-25 seq6476 125 6e-23 seq34430 123 2e-22 seq34431 100 2e-15 seq6559 95.1 1e-13 seq61987 91.5 1e-12 >seq6511 Length=3315862 Score = 132 bits (146), Expect = 4e-25 Identities = 146/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAAT 550407 ||||||||||| |||| ||| |||| | || || ||| | | |||| || || Sbjct 2206138 ATGAAAATGAAGGAAACCGCCGCGGCTTAT-TTAAACACTCCAGTAAAGAATGCTGTTAT 2206080 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 ||||||||||| |||||||| |||||||| || ||||| ||||| |||||||| | || Sbjct 2206079 TACTGTACCAGCGTATTTTAACGACTCACAGCGACAAGCGACTAAGGATGCTGGTCAGAT 2206020 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 | ||||| | ||||| |||||| | || ||||| || || || ||||| ||||| ||||| Sbjct 2206019 TTCTGGATTAAATGTGCTTCGTGTAATTAATGAGCCAACCGCAGCTGCGCTTGCTTATGG 2205960 Query 550528 ACTTGATAAACA 550539 | |||||||| Sbjct 2205959 CATGGATAAACA 2205948 >seq6476 Length=10381176 Score = 125 bits (138), Expect = 6e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | ||| || ||| ||||| || || ||||| | ||||| || Sbjct 5657123 AGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAAAGAGTCCTG 5657064 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||| || ||||||||||| || | |||||||| || ||||| |||||| Sbjct 5657063 CCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGGGGAATGCCTTCT 5657004 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || ||||| || || |||||| ||| ||||| |||| | | |||||| || Sbjct 5657003 TTGTCTTGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGAGGCTTCAACTTCGAGGGTG 5656944 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| ||||| |||||||| || || ||||||||| Sbjct 5656943 ATGGTTTTGCCAGTGAGAGTTTTCACAAAGATTTGCATA 5656905 Score = 122 bits (134), Expect = 7e-22 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || |||||||| ||| ||| || || |||||||||| |||||||| Sbjct 5656895 AGACGTAGAACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTTCTG 5656836 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || ||||| || || ||||| || | | ||| ||||| |||||||| |||||| Sbjct 5656835 CCATCCTCTAGTTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACCTTCT 5656776 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAGT 563435 || || || || || ||| || ||| || || |||| | | || ||||| || Sbjct 5656775 TTGTCCTGGATCTTAGCTTTGACATTCTCTATAGTGTCAGAA-GCTTCCACCTCGAGGGT 5656717 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| |||||||||||||| ||||| |||||||| Sbjct 5656716 GATGGTTTTTCCAGTAAGAGTTTTCACGAAGATTTGCAT 5656678 Score = 87.8 bits (96), Expect = 1e-11 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 563272 TGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGT 563331 || || ||| |||||| || |||||||| | || ||||| ||||| || || Sbjct 5657336 TGGAGTGTAGATTCTTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCGTCTTCCAGCTGC 5657277 Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || || ||||| | | || ||||| || |||||||||||||| || || ||||| Sbjct 5657276 TTGCCAGCGAAAATCAAACGCTGTTGATCCGGTGGAATTCCTTCTTTGTCCTGGATTTTG 5657217 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTA 563451 || || || ||||| |||| | | |||||| || | ||||| || || Sbjct 5657216 GCCTTCACGTTTTCTATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTTTTGCCGGTG 5657157 Query 563452 AGAGTTTTAACGAAAATTTGCAT 563474 |||||||| ||||| |||||||| Sbjct 5657156 AGAGTTTTCACGAAGATTTGCAT 5657134 >seq34430 Length=319 Score = 123 bits (136), Expect = 2e-22 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | ||| || ||| ||||| || || ||||| | ||||| || Sbjct 299 AGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAAAGAGTCCTG 240 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||| || ||||||||||| | | |||||||| || ||||| |||||| Sbjct 239 CCATCTTCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGGGGAATGCCTTCT 180 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || ||||| || || |||||| ||||||||| |||| | | |||||| || Sbjct 179 TTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAACTTCGAGGGTG 120 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| || || |||||||| ||||| |||||||| Sbjct 119 ATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 82 >seq34431 Length=440 Score = 100 bits (110), Expect = 2e-15 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || || ||||| ||| ||| || ||| || ||||| | ||||| || Sbjct 192 AGACGCAGAACCAGGTGAAGTGTAGATTCCTTTTGAATGTTATAATCTGAAAGAGTCCTG 133 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||| || ||||||||||| || | || ||||| || ||||| |||||| Sbjct 132 CCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGGGGAATGCCTTCT 73 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG 563416 || ||||| || || |||||| ||| ||||| |||| Sbjct 72 TTGTCTTGGATCTTGGCTTTTACGTTCTCGATTGTGTCAG 33 >seq6559 Length=1815223 Score = 95.1 bits (104), Expect = 1e-13 Identities = 154/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 563259 ACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGA 563318 |||||| || | ||| | ||| ||| || ||||||||| |||| || || | Sbjct 1624871 ACGGAGCACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGACC 1624812 Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 ||| || || |||||||||||||| || | ||| || || || || ||||| |||||||| Sbjct 1624811 ATCCTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGGTCCGGTGGAATGCCTTCTTT 1624752 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC---AGTGTGAGTACATTCGAGAGT 563435 || ||||||||| ||| || ||| ||||| || || | | || || | ||| Sbjct 1624751 GTCCTGAATTTTTGCTTTGACATTCTCGATTGTGTCCGAAGCTTCA--AC-CTCCAAAGT 1624695 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || ||||||||||| || ||||| Sbjct 1624694 GATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 1624656 Score = 95.1 bits (104), Expect = 1e-13 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| |||||||||| || || | || || || ||||| ||||| || Sbjct 1625303 TTCTTTTTGAATGTTGTAATCAGAAAGCGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAA 1625244 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 || | ||| |||||||| || || |||||||| ||||| |||||||| ||| || Sbjct 1625243 GATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACGTT 1625184 Query 563403 CTCAATTGTATCAGTGTGAGTACAT-TCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||| || || |||| || | | || || || | ||||| || || | ||||||| Sbjct 1625183 CTCGATCGTGTCAGA-TGCCTCAACCTCCAGTGTGATGGTTTTTCCTGTTAAGGTTTTAA 1625125 Query 563462 CGAAAATTTGCATA 563475 |||||||||||||| Sbjct 1625124 CGAAAATTTGCATA 1625111 Score = 91.5 bits (100), Expect = 1e-12 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| || ||||||| || || | ||| || ||||||||||||||||| Sbjct 1625075 TTCTTTCTGAATGTTATAATCAGAGAGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAA 1625016 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 || | ||||||||||| || || |||||||| || ||||||||||| ||| || Sbjct 1625015 GATCAACCTTTGCTGATCTGGGGGGATTCCTTCCTTGTCTTGAATTTTGGCTTTGACATT 1624956 Query 563403 CTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAAC 563462 ||| || || || | | ||| | || | || || || || | ||| || || Sbjct 1624955 CTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTGAC 1624896 Query 563463 GAAAATTTGCATA 563475 ||||||||||||| Sbjct 1624895 GAAAATTTGCATA 1624883 Score = 89.7 bits (98), Expect = 4e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || || |||||||| ||||| || ||||| ||| |||||||||| || || Sbjct 1626016 CTAAGTCGAAGTACAAGGTGAAGCGTGGACTCTTTCTGAATGTTGTAATCAGAAAGTGTG 1625957 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | || || || ||||| ||||| || || | || |||||||| |||||||| ||| Sbjct 1625956 CGGCCGTCCTCGAGCTGTTTACCGGCGAAGATTAACCTCTGCTGATCTGGAGGAATACCT 1625897 Query 563374 TCTTTATCTTGAATTTT 563390 ||||| ||||||||||| Sbjct 1625896 TCTTTGTCTTGAATTTT 1625880 >seq61987 Length=372 Score = 91.5 bits (100), Expect = 1e-12 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| || ||||||| || || | ||| || ||||||||||||||||| Sbjct 97 TTCTTTCTGAATGTTATAATCAGAGAGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAA 156 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 || | ||||||||||| || || |||||||| ||||| |||||||| ||| || Sbjct 157 GATCAACCTTTGCTGATCTGGGGGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACATT 216 Query 563403 CTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAAC 563462 ||| || || |||| | ||| | || | || || || || | ||||| || Sbjct 217 CTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGAC 276 Query 563463 GAAAATTTGCATA 563475 |||||| |||||| Sbjct 277 GAAAATCTGCATA 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4025182219736120