Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_016073.1 Length=157950 Score E Sequences producing significant alignments: (Bits) Value seq2061 318 6e-82 seq2042 192 6e-44 >seq2061 Length=505 Score = 318 bits (352), Expect = 6e-82 Identities = 339/446 (76%), Gaps = 6/446 (1%) Strand=Plus/Plus Query 106485 CATTTTTATGAAGCAGCAACGATGCC---GCCACCGGATTCGATTTCGCTGAACTCCATA 106541 |||| |||||| || || |||||||| |||||| ||| | |||| |||| | || Sbjct 32 CATTGTTATGACGCGGCCACGATGCCCATGCCACC---TTCCACTTCGGAGAACGCAATG 88 Query 106542 TCCGGTCGAACTGCAGCAAAATCCAAATAAATCCAGTTAATGCTGTACTCAGGCTTCAAC 106601 ||||| || || || || ||||| | || |||||||| |||||||| || || |||| | Sbjct 89 TCCGGACGGACGGCTGCGAAATCGAGGTAGATCCAGTTGATGCTGTATTCTGGTTTCAGC 148 Query 106602 CAAATGCCAGCGACCATCTGGTTTGCCGCGATGATGTCAGCAGTGTTGTTATCTTCATCA 106661 || || || |||| ||| ||||| || || | | ||| | |||||| ||||| ||| Sbjct 149 CAGATACCTGCGATCATTTGGTTGGCGGCTACAACCGAAGCCGGGTTGTTGTCTTCGTCA 208 Query 106662 CACTTGACTTTACCATCGTAAATCGCGCCCATATTTGCCAGCTGGCGAATATATGGACGA 106721 || ||||| ||||||||| || || ||||| ||||||||||| |||||| Sbjct 209 CATTTGACCTTACCATCGACGATTGCACCCATGCCGATCAGCTGGCGAACATATGGGGTG 268 Query 106722 ACCGCATTGCTGAACAGACCACGTGTAAACGCGTCATTGTTCTCACCAAGATAGTATTTG 106781 ||||| ||| |||||| || |||||||| || || ||||| || || |||||||| Sbjct 269 ACCGCGTTGGTGAACAACTGGCGCGTAAACGCATCGTTATTCTCGCCCAGGTAGTATTTA 328 Query 106782 GCTATTGCGGCGATGTTCTGCTCAGCCATGATGAACAGACCACGAACGTTGATGCGGTCA 106841 || || || | |||||| |||||||||||| || |||||| |||||||||||||| Sbjct 329 GCAATGGCAGAGATGTTGGTCTCAGCCATGATAAAAGTACCACGGACGTTGATGCGGTCG 388 Query 106842 AACGCCGACGGGCGGGTCAGGCCAGTTTTGTCACCATACAGGACGATGCCTTCATTGGAG 106901 ||||| |||||||||||||| ||||||||||| |||| |||||||||||| ||| | Sbjct 389 AACGCACTTGGGCGGGTCAGGCCGGTTTTGTCACCGTACAACACGATGCCTTCAGTGGTG 448 Query 106902 AAGGTTACGATGCTGTTGATCTGATT 106927 ||||| ||||||||||||||||| || Sbjct 449 AAGGTAACGATGCTGTTGATCTGGTT 474 >seq2042 Length=482 Score = 192 bits (212), Expect = 6e-44 Identities = 220/296 (74%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 104179 CGGCTCTTAGGGATCATTAGAGCATCATAGAGTTTTTCACGGAAATAATTCACATGGTCC 104238 ||||||||||| ||| | |||||| | || || || ||||| ||||||||||| ||| Sbjct 187 CGGCTCTTAGGAATCTTGAGAGCACCGTACAGCTTGCTGCGGAAGTAATTCACATGATCC 246 Query 104239 ATTTCACCCAATTGATTCCCACCACCAACAGTTGCAATTTCTGTGGCGTTTTGGCCTTCA 104298 |||| |||| || | || ||||| | || ||||| || ||||| || || ||| Sbjct 247 ATTTGGCCCAGCTGGTCACCGCCACCGATGGTGCTTATTTCGGTCGCGTTCTGTCCCTCA 306 Query 104299 CGACGAGGCAACCAATAATCCTCTGCAATACCCATAAGATGGGCATTACCTGTTATCTTA 104358 ||||| |||| ||| || ||||| || |||||||| || || | | ||| || ||| Sbjct 307 CGACGTGGCATCCAGTAGTCCTCAGCGATACCCATGAGGTGAGTGTCGCCTTGTACCTTG 366 Query 104359 CCAGTGGTGCGGTCATATGCGTTGCGGTTTTTGAATTTACCCATCATCATGGTCATGTAT 104418 || || |||| ||||| | ||| || || || ||||||||||||| ||| || Sbjct 367 CCGGTCTGACGGTTATATGACAGGTTGTTCTTAAACTTGCCCATCATCATGGCCATATAC 426 Query 104419 TCTTCAGCAGATTTCTTACCGAGAGTACCGACGTCAAGATAGAATGCGCGTTTCTC 104474 |||||||| ||||||||||| | ||||||||||||| ||||||||||| ||||| Sbjct 427 TCTTCAGCGGATTTCTTACCCAACATACCGACGTCAAGGTAGAATGCGCGCTTCTC 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504820659876800