Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_016570.1 Length=157304 Score E Sequences producing significant alignments: (Bits) Value seq2061 327 1e-84 seq2042 174 2e-38 >seq2061 Length=505 Score = 327 bits (362), Expect = 1e-84 Identities = 341/446 (76%), Gaps = 6/446 (1%) Strand=Plus/Plus Query 106138 CATTTTTATGAAGCAGCAACGATGCC---GCCACCGGATTCGATTTCGCTGAACTCCATA 106194 |||| |||||| || || |||||||| |||||| ||| | |||| |||| | || Sbjct 32 CATTGTTATGACGCGGCCACGATGCCCATGCCACC---TTCCACTTCGGAGAACGCAATG 88 Query 106195 TCTGGTCGAACTGCAGCAAAATCTAAGTAGACCCAATTAATGCTGTACTCAGGCTTCAAC 106254 || || || || || || ||||| | ||||| ||| || |||||||| || || |||| | Sbjct 89 TCCGGACGGACGGCTGCGAAATCGAGGTAGATCCAGTTGATGCTGTATTCTGGTTTCAGC 148 Query 106255 CAAATGCCTGCAACCATTTGGTTTGCCGCAATGACATCAGCAGTGTTGTTGTCTTCATCA 106314 || || ||||| | ||||||||| || || | || ||| | |||||||||||| ||| Sbjct 149 CAGATACCTGCGATCATTTGGTTGGCGGCTACAACCGAAGCCGGGTTGTTGTCTTCGTCA 208 Query 106315 CATTTGACTTTACCATCGTAAATCGCGCCCATATTTGCCAGCTGGCGGATATATGGACGA 106374 |||||||| ||||||||| || || ||||| ||||||||| | |||||| Sbjct 209 CATTTGACCTTACCATCGACGATTGCACCCATGCCGATCAGCTGGCGAACATATGGGGTG 268 Query 106375 ACCGCATTGCTGAACAGACCACGTGTAAACGCGTCATTGTTCTCACCAAGATAGTATTTG 106434 ||||| ||| |||||| || |||||||| || || ||||| || || |||||||| Sbjct 269 ACCGCGTTGGTGAACAACTGGCGCGTAAACGCATCGTTATTCTCGCCCAGGTAGTATTTA 328 Query 106435 GCGATTGCGGCGATGTTCTGCTCAGCCATGATGAACAGACCACGAACGTTGATGCGGTCA 106494 || || || | |||||| |||||||||||| || |||||| |||||||||||||| Sbjct 329 GCAATGGCAGAGATGTTGGTCTCAGCCATGATAAAAGTACCACGGACGTTGATGCGGTCG 388 Query 106495 AACGCCGACGGGCGGGTCAGGCCAGTTTTGTCACCATACAGGACGATGCCTTCATTGGAG 106554 ||||| |||||||||||||| ||||||||||| |||| |||||||||||| ||| | Sbjct 389 AACGCACTTGGGCGGGTCAGGCCGGTTTTGTCACCGTACAACACGATGCCTTCAGTGGTG 448 Query 106555 AAGGTTACGATGCTGTTGATCTGATT 106580 ||||| ||||||||||||||||| || Sbjct 449 AAGGTAACGATGCTGTTGATCTGGTT 474 >seq2042 Length=482 Score = 174 bits (192), Expect = 2e-38 Identities = 216/296 (73%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 103832 CGGCTCTTAGGGATCATTAGAGCATCATAGAGTTTTTCACGGAAATAGTTCACGTGATCC 103891 ||||||||||| ||| | |||||| | || || || ||||| || ||||| |||||| Sbjct 187 CGGCTCTTAGGAATCTTGAGAGCACCGTACAGCTTGCTGCGGAAGTAATTCACATGATCC 246 Query 103892 ATTTCGCCCAATTGATTCCCACCCCCAACAGTCGCAATCTCTGTAGCATTCTGACCTTCG 103951 |||| ||||| || | || || || | || || || || || ||||| || || Sbjct 247 ATTTGGCCCAGCTGGTCACCGCCACCGATGGTGCTTATTTCGGTCGCGTTCTGTCCCTCA 306 Query 103952 CGGCGCGGCAACCAATAATCCTCTGCAATACCCATAAGATGGGCATTACCTGTTATCTTA 104011 || || |||| ||| || ||||| || |||||||| || || | | ||| || ||| Sbjct 307 CGACGTGGCATCCAGTAGTCCTCAGCGATACCCATGAGGTGAGTGTCGCCTTGTACCTTG 366 Query 104012 CCAGTGGTGCGGTCATATGCGTTGCGGTTTTTGAATTTACCCATCATCATGGTCATGTAT 104071 || || |||| ||||| | ||| || || || ||||||||||||| ||| || Sbjct 367 CCGGTCTGACGGTTATATGACAGGTTGTTCTTAAACTTGCCCATCATCATGGCCATATAC 426 Query 104072 TCTTCAGCAGATTTCTTACCGAGAGTACCGACGTCAAGATAGAATGCGCGTTTCTC 104127 |||||||| ||||||||||| | ||||||||||||| ||||||||||| ||||| Sbjct 427 TCTTCAGCGGATTTCTTACCCAACATACCGACGTCAAGGTAGAATGCGCGCTTCTC 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502755469918720