Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_016761.1 Length=38684 Score E Sequences producing significant alignments: (Bits) Value seq42081 111 4e-20 seq37339 111 4e-20 >seq42081 Length=911 Score = 111 bits (122), Expect = 4e-20 Identities = 174/246 (71%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 13506 AAACCCTTGGGTCGGGCAGACTGGTAGTGATGGCCGGTTTGCAAAATTCGAGACCCCTGA 13565 ||| || |||| || || || |||||||| || || ||||| ||||||||||| ||||| Sbjct 259 AAATCCATGGGAAGGCCAAACGGGTAGTGACGGTCGCTTTGCCAAATTCGAGACTCCTGA 200 Query 13566 GCATGGGATCCGCGCGCTGGGCCGCAACCTCATATCCTAC--CAG-CGGCAGGGGATTGA 13622 |||||| || |||||| | ||| ||||| | || ||| ||| | ||| ||| | || Sbjct 199 GCATGGAATTCGCGCGTTAGGCAAGAACCTGCTGTCATACAACAGACTGCATGGGCTGGA 140 Query 13623 TACCGTTGGAGAGATCATTAACCGCTGGGCACCGCCTTCTGACAATAACGACACAGCTGC 13682 ||| ||||| ||||| |||| || ||||| || || || |||| | |||| | Sbjct 139 TACTGTTGGGGAGATAATTACTCGATGGGCTCCCCCAAAAGAAAATA---AAACAGACTC 83 Query 13683 ATACATCAAAGCGGTTTGTGCGCAGTTAGGCGTAACGGCAAACCAGCCTCTTGATGCTTC 13742 ||||| || || | |||| ||| | || || || || | |||| |||||| | Sbjct 82 TTACATTAAGGCCATCTGTGAACAGCTTGGTGTTACATCAGAACAGCAAATTGATGTGAC 23 Query 13743 CAATCC 13748 |||||| Sbjct 22 CAATCC 17 >seq37339 Length=736 Score = 111 bits (122), Expect = 4e-20 Identities = 175/251 (70%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 8931 ATTCAACCGAGCTTTGCCGGTGGTGAAATTGGTCCGTCACTGTATGGCCGCATTGATATG 8990 ||||||||| |||||| ||||| ||| | || || || ||||| |||| || Sbjct 5 ATTCAACCGTCCTTTGCTGGTGGCGAAGTATCGCCAAGCCTTTACGGCCGTGTTGACCTG 64 Query 8991 TCAAAGTATCAGGTGGCACTGCGCAAGTGCGATAACTTCATTGTTCGCCAATATGGTGGT 9050 || || ||| | ||||| ||| |||||||||||| |||||||||||||| Sbjct 65 GAGAAATACCAGACCTCTCTGCGACGTTGCCGTAACTTCATTGTCCGCCAATATGGTGGC 124 Query 9051 GTAGAGAACAGACCAGGTACGCGCTTTGTTGGTCCTGCTAAATACCCTGATCGCAAGTGC 9110 ||||||||| | || || || || | ||| | || || || | || ||||||||||| Sbjct 125 GTAGAGAACCGTCCCGGGACACGGTATGTAGCGCCGGCAAAGTTTCCCGATCGCAAGTGT 184 Query 9111 CGGTTAATCCCGTTCCAGTTCTCGACCGTACAGACCTATGCTCTGGAGTTCGGGCACAAC 9170 || | ||||||||||||||| || | || ||||||| || || | || || || Sbjct 185 CGCCTGATCCCGTTCCAGTTCAACACTGAGCAAACCTATGTGCTCGAAGTTGGAGACCAC 244 Query 9171 TATATGCGAGT 9181 ||| | || || Sbjct 245 TATTTCCGCGT 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123552964588176