Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6583 113 4e-20 >seq6583 Length=1017230 Score = 113 bits (124), Expect = 4e-20 Identities = 178/255 (70%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 30132 CCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCC 30191 ||| | ||| |||| |||||| |||| || || || || |||| ||||||||| || Sbjct 910582 CCCAGTGTAATCTGTGTGCATGTCTTTGTATTCAGCCCCAAAGTGCCGCCACTGGAAACC 910641 Query 30192 GTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTC 30251 ||| || ||||||| || ||||| || || | |||||| ||||| || | Sbjct 910642 GTAGACAGGTCCCAAATCGCCCTCCTCTCTATCGGTGAAGCCGTAGGAGTCCAGGAAAGC 910701 Query 30252 TCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGT 30311 || || || || ||||||| || | || || || | | ||||| ||||| ||||| Sbjct 910702 TCGCGAGCCATTTTCGTCCCAAATATGAACACCTTTAGCCGTTAGCTCCTTGGAATTTGT 910761 Query 30312 GGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGT 30371 || ||| ||| |||||||||||| ||||| || || || ||| || |||| || || Sbjct 910762 CGATCCTTTGATGAACCACAGCAGTTCCTCGACCACCGCTCGCCAGAACACCCGTTTAGT 910821 Query 30372 CGTGAGGAGGGGAAA 30386 || || || ||||| Sbjct 910822 TGTCAGTAGTGGAAA 910836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408230213659724