Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq2076 123 4e-23 >seq2076 Length=446 Score = 123 bits (136), Expect = 4e-23 Identities = 166/227 (73%), Gaps = 12/227 (5%) Strand=Plus/Plus Query 64811 CATCATAAAGTCAGAACCCATGCCCTGTACTGGACTGTTTACAGATTGACGCTCAGAACG 64870 |||||| ||||||||||| | ||||||||||||||||||||| | |||| ||| | Sbjct 33 CATCATCAAGTCAGAACCGAAGCCCTGTACTGGACTGTTTACTGCACGACGATCACA--- 89 Query 64871 CGACAGGATGT----TGCCCGCGTCTTCGTGTGATTGCGGAGTCATCAGGCCCCACAGGT 64926 || ||| |||| || ||| |||| ||| || | || ||||| |||||| || | Sbjct 90 CG-CAGCATGTACCATGTTCGCTTCTTTGTGCGACTCAGGCAGCATCAAGCCCCAAAGAT 148 Query 64927 TACGACGACGGCCAAGCGGCGATTCCACATACAGGAATTTTC--GTGCATGTTCTTTGAT 64984 ||||||||| |||| |||||||| ||| | | | || || ||||| | || || Sbjct 149 GACGACGACGACCAACAGGCGATTCAACAAAGAAG--TTCTCATGTGCAAACTTCTTAAT 206 Query 64985 CTTGTCGAACCAACCTGCTCCCACCGGGAAGCGTTTAAAGAACTTGG 65031 |||||||||||| | || || ||||| ||||||| |||||||| Sbjct 207 CTTGTCGAACCATTTTAAGCCAACAGGGAATCGTTTAAGGAACTTGG 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896720824863040