Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq43336 318 6e-82 seq1998 248 8e-61 seq1985 192 6e-44 seq1991 138 1e-27 seq37382 114 1e-20 seq37313 91.5 1e-13 seq39135 87.8 2e-12 >seq43336 Length=1079 Score = 318 bits (352), Expect = 6e-82 Identities = 359/480 (75%), Gaps = 12/480 (3%) Strand=Plus/Plus Query 7 GCTACATTCGCACCCGCGAGTCGTAAGCAACAGATGGTTCTCGAATCTAAAGCACAGATC 66 || || ||||| ||||| ||| ||| ||||||||| | || |||| | || |||| Sbjct 606 GCCACGTTCGCTCCCGCCAGTATTAAACAACAGATGATCCTTAAATCAGACGCTGAGATT 665 Query 67 CTCATCATGGGTGGCGCAGCAGGCTCCGGCAAATCTTACCTGCTCCAGTTGATGCCCCTG 126 || ||||| || || || || || || || || || || ||||| ||||| ||||| ||| Sbjct 666 CTAATCATCGGCGGTGCTGCTGGTTCAGGGAAGTCCTATCTGCTTCAGTTAATGCCTCTG 725 Query 127 TTGATCATTGATGATCCTCGTACAGCTTGCATCATGTTCCGCCGTACAGTGCCTCAGATT 186 || || ||||| || || || ||||| || ||||||||||||| |||| || ||| | Sbjct 726 TTTATTATTGACGACCCGCGAACAGCCTGTGTCATGTTCCGCCGATCAGTACCACAGCTA 785 Query 187 CGTGGTCAGGGCGGTCTGTTCGACAAAGCGAAAGATATTTACAACCAGCTTCCTCCGGTC 246 |||||||| || |||||||| ||||| || ||||||||||| ||||| || || | Sbjct 786 CGTGGTCAAGGTGGTCTGTTTGACAAGGCTAAAGATATTTATAACCAACT-----CGAT- 839 Query 247 GTCAAGCCTAAG------TTCAAAGAGAACGAGATGATTGCGACCTTCCCGAACGGGGCG 300 ||||| |||| || ||||| |||||| || ||||| |||||||| Sbjct 840 GTCAACTCTAAACCACGATTTCGTGAGAATGAGATGGAAGCTTTATTCCCAAACGGGGCT 899 Query 301 ACGGTGAAGTGGCAGTCCATGCAGCACATCAACGATAAGTATAACATCCAGGGTCTGGAA 360 | || ||||||||||| ||||||||| | || | ||| | |||| ||||| || ||| Sbjct 900 AAAGTTAAGTGGCAGTCGATGCAGCACGTAAAGAACAAGCTTGACATTCAGGGCCTAGAA 959 Query 361 TTTACTTTCATTGGTGTGGATGAAGGAACCCAGTTTGACTGGGAACAGCTTGAGTACATG 420 |||||||| || || || || |||| ||||||||||| ||||||||||| || |||||| Sbjct 960 TTTACTTTTATAGGCGTAGACGAAGCCACCCAGTTTGAATGGGAACAGCTCGAATACATG 1019 Query 421 ATGTCGCGTTTGCGTTCAAACTCAAAGTACCCTTCCCGTATGGTCGTATCTTGTAACCCA 480 ||||| |||||||||||| || || ||||| ||||| ||||| | || ||||||||| Sbjct 1020 ATGTCTCGTTTGCGTTCATCTTCTAAATACCCGTCCCGAATGGTTATGTCATGTAACCCA 1079 >seq1998 Length=468 Score = 248 bits (274), Expect = 8e-61 Identities = 298/403 (74%), Gaps = 4/403 (1%) Strand=Plus/Minus Query 2191 GGTGTCTCTCCTCTGGTAGGGTGCTACCGAGCGTGGCGTGAAAAGATTCTGATTGAGAAC 2250 ||||| || ||||| || || || ||||| || | || |||||| |||| ||||||||| Sbjct 402 GGTGTTTCACCTCTAGTTGGTTGTTACCGCGCTTTCCGAGAAAAGGTTCTTATTGAGAAC 343 Query 2251 CTTGAGGTTGTTGGCGCAACCAAGGACATGGGTGGTGTGATCGAATTGAAGATCCCTTCC 2310 | || || | || ||||| |||||| | || || | || || | ||||| |||||| Sbjct 342 TTGGAAGTCATCGGGGCAACTAAGGACCTCGGCGGGATCATTGAGCTTAAGATTCCTTCC 283 Query 2311 CAGATCCTGAACAAAGCTGCAATGGACCAGTCTTCTCCTGAAGCAGAAATGGTCCGTGGC 2370 ||||| ||||| || ||||| ||| || | || ||||| |||||||| || Sbjct 282 AGTATCCTTAACAAGGCAGCAATCGACAAGAATAGCCCAGAAGCTGAAATGGTTGAAGGA 223 Query 2371 CTGATGTCTGACGCTGCAAATGCCCACTCCGGTGAGCAGTCATTCTTCATGCTGCCATCC 2430 ||||| || || || || |||||| | ||||||||| | ||||||||| |||| || Sbjct 222 TTGATGCAGGATGCGGCTAACGCCCACGCAGGTGAGCAGGCCTTCTTCATGTTGCCGTCA 163 Query 2431 GATACAAAGGATAACGCCCCTCAGTATTCA--ATGACCCTCAAGGGCATCGACGGGATGG 2488 |||| ||||| |||||||| || |||| ||||| || || || ||||| || | Sbjct 162 GATATGAAGGAAAACGCCCC--AGCATTCTCCATGACACTTAAAGGTATCGAAGGTTCCG 105 Query 2489 GTAAGCAGTACAGCACCGCACAGTTGATCAGTGACCGTAAGAAGTCAATCCTTGATCGTC 2548 |||||||||| ||||| || | |||||||| ||||||||||| ||| | || || Sbjct 104 GTAAGCAGTATAGCACTTCAGCCCTAATCAGTGAACGTAAGAAGTCTATCTTGGACCGCT 45 Query 2549 TGGGCGCTGGCTTCATCAACGTGGGTAACGACAAAGGCGGTTC 2591 | ||||||||||| || ||||| ||||| |||||||||||||| Sbjct 44 TCGGCGCTGGCTTTATGAACGTAGGTAATGACAAAGGCGGTTC 2 >seq1985 Length=318 Score = 192 bits (212), Expect = 6e-44 Identities = 204/270 (76%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 16134 AGGTAAAACTTCTTCTGGGCAGTACGTTGACGTGATTCGCTTCTCCCATTGGGTTAAATT 16193 ||||||| ||||||||| | ||| | |||||| || ||||| ||||| ||| | || || Sbjct 303 AGGTAAATGTTCTTCTGGTCNGTATGCTGACGTTATCCGCTTNTCCCACTGGTTGAAGTT 244 Query 16194 CCGTATGGAAGAATCCGTGTTCGCGTACATGAAGCGCCGTTCTGACATGGGTCTGTCCAT 16253 |||||||||||| || || ||| | |||||| | | || || |||||||| ||||||| Sbjct 243 CCGTATGGAAGAGTCAGTATTCTCCTACATGCACCAGCGCTCAAACATGGGTATGTCCAT 184 Query 16254 GAAGATGAGCGACGAAGACCTGCCTGTACTGAAGTCTGTTCTGATGAACAACCCGATCAA 16313 ||||||||||||||| ||| |||| |||| |||| | ||||| | || || || Sbjct 183 GAAGATGAGCGACGATGACTTGCCAAACCTGAGCACTGTGATCCTGAACGATCCTATTAA 124 Query 16314 CATCGGTATTCGTAATGGTGGTATTCTGACTGGCTACGACGCTGAAAACAAAGTGTCCTA 16373 | | ||||||||||||||| || | || || || || | |||||||| || | ||| Sbjct 123 CGTAGGTATTCGTAATGGTTCCATCTTAACCGGATATGATGAGGAAAACAAGGTCTTCTA 64 Query 16374 CGACCCGACGATCACTATTCCGAAACGCGC 16403 |||||| | ||||| ||||| ||||| || Sbjct 63 CGACCCAATCATCACCATTCCAAAACGAGC 34 >seq1991 Length=333 Score = 138 bits (152), Expect = 1e-27 Identities = 238/337 (71%), Gaps = 8/337 (2%) Strand=Plus/Minus Query 119826 CAACGTGCTGAACATAAATACGACCAGTTTGTGAACGCTCCTGCCCAAAGACAGAGAATG 119885 ||||||| || | ||||||||| ||||| |||| |||||||||| | |||||||| | Sbjct 333 CAACGTGTTGGATATAAATACGTCCAGTCTGTGTACGCTCCTGCGCTGTAACAGAGAAAG 274 Query 119886 CGTCCGCCGCAGGGATAGACTTCTTCGCC--ACGGAAGGATCTGCTTCCAGTTCCTCGTA 119943 | ||| ||| ||| ||| |||| || | |||||| ||| || | || Sbjct 273 CTTCCAATGCATCGATCT-CTT-TTCGTGGAACCGTAGGATCCTTTTCAAGCTTAGTATA 216 Query 119944 AAGCTGTTGGAATTTCTCCTGATCAGAGAAGAAATATTCGTACAGCTTACCGCCAGCCAC 120003 | | | ||| |||||||| ||||| | ||| || | ||| || ||||| Sbjct 215 CAACGCCTCAAATCCATCCTGATCTTCAAAGAAGAGTCGGTAAAGTTCACCTCCCGCCAC 156 Query 120004 GTTCGGATGGAACAACGTGATGTTCTTGCCCTGCTGGAGGCGGGTATAAAGCAGCTTGTT 120063 |||||||||||||| | ||| || || ||| || || |||| | || |||||| Sbjct 155 GTTCGGATGGAACAGGGAGATTTTACCTCCAGTCTGAAGACGCTTATACATCAACTTGTT 96 Query 120064 GATCTGGAGGCCGTAGTCCACATGGCGAGCACGAGTGCTCT-CGGTGCCACGGTTGTTCT 120122 | || | ||||||||| ||||||||| |||| || |||| | || || ||||| |||| Sbjct 95 CAATTGCAAGCCGTAGTCAACATGGCGAACACGTGT-CTCTTCTGTTCCTCGGTTATTCT 37 Query 120123 TCAGAACGATCAGGCTCT-CAAAATCCCAGTGCCACA 120158 | || || ||||| |||| |||||||||||||||||| Sbjct 36 TAAGGACAATCAG-CTCTTCAAAATCCCAGTGCCACA 1 >seq37382 Length=576 Score = 114 bits (126), Expect = 1e-20 Identities = 345/521 (66%), Gaps = 14/521 (3%) Strand=Plus/Minus Query 56133 CCCATCTTAACCCCGGCACCGACGAACATACCTTCCCCGAGACGACGGCCCAACGTCAGG 56192 ||||| || || || ||||| | ||| ||| || |||| ||| ||||||| ||| Sbjct 516 CCCATTTTTACACCAGCACCAATGAAGTAACCCTCACCGATACGTCGGCCCAGAGTCTTC 457 Query 56193 CGCGTCATTGTAGGCCAAGGCCA-TTTCTTCCCGAGTTTAGGGATCTCGTGTGCCTTCTC 56251 ||||| |||||||||||||| | ||| || ||||||||| || || || Sbjct 456 TTGGTCATGGTAGGCCAAGGCCACGGACGGCCCAAG-ACAGGGATCTCTTGAGCTTTAGT 398 Query 56252 ACGGAACTGAGAGTAGG-TCGCAAAGCCGTCCGGCACGTACTCTTTCGGCTTCATCGCTG 56310 ||||| ||| |||| ||| ||| ||||| || | |||||| | || ||||| || Sbjct 397 ACGGATCTGCTCATAGGTTCGGAAA-CCGTCAGGGATGTACTCGATAGGTTTCATGATTG 339 Query 56311 CCCAGAAAAGCTGCTGCGCCAAGCCCTTATTGTACATGTCGCAAGGGTCCATGTCTTCAG 56370 |||||| | ||| | |||| || | |||||| || || || ||| | || || | Sbjct 338 ACCAGAACAACTGGTTAGCCATACCTTCGCCGTACATATCACACGGATCCTTATCATCTG 279 Query 56371 GGATATCGACGACTTTCATCTGTGGGATGACAGAATACACTGCCGCCACGGCATCTTTGC 56430 | | || | || |||||| || || | |||||| || || || ||||| | Sbjct 278 GCAGGTCAGCTACACGCATCTGAGGAATAAGAGAATAAACCTGAGCTGTTGCCTCTTTAC 219 Query 56431 CCTTCATGATACCCTTGGCT--TTCTCAGTTTCGTTCGCCCGGTCGGCGTCGAAAGCCAC 56488 | || || ||||||| ||| ||||| | || | ||| || || || ||| ||| Sbjct 218 CTTTGATAATACCCT--GCTGCTTCTCCGCATCAGTTGCCTTATCCGCATCAAAA--CAC 163 Query 56489 AAT--GATCTCTTCGAACTTGCTCAGGAGCTTATAGTTGTTCTTCTGAGACAGGTTCTGT 56546 ||| ||||| |||| ||| || ||| ||| |||||||| || ||| | Sbjct 162 AATACGATCTGTTCGTGCTTCTCCACATATTTAAGGTTCTTCTTCTGGCCCAAGTTACGG 103 Query 56547 ACTGCGTTGGATGTGCCGTTGGAGATTGACACAACCGTGAAGTTAGGCTTACGGGCATTG 56606 || || ||||| ||||||||||| | || | ||||| ||| |||||| | | Sbjct 102 ACAGCATTGGAAGTGCCGTTGGATACGGAGATTACCGTTGGGTTGATCTTACGAGTGCTA 43 Query 56607 CCGTC-CTTCGATTTATAGTTCTCGCGGAGAACCTGCCACA 56646 || || | || |||||||||||| || | | ||||||| Sbjct 42 CCATCACGTC-CTTTATAGTTCTCTCGCATGGCTTGCCACA 3 >seq37313 Length=829 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/121 (79%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 18882 TACGGTGTATTTGCCGCAGGTGCAAGTGT-TCTT-CAACAAGGCCAGTTCTTCCAGGGTA 18939 || |||| ||||||||||||| |||| | |||| || || || |||||||| || || Sbjct 711 TATGGTGCATTTGCCGCAGGT--AAGTCTGTCTTACAGCAGGGACAGTTCTTTCAAGGAT 768 Query 18940 TGGATGCAACGATGACGATGGTTTCTGATTCATCCGAAGAAGCTGCAAAAAGAATCCAGT 18999 |||| || || ||| ||||||||||||||| || |||||||||| || | ||||||| Sbjct 769 TGGAGGCCACAATGTTGATGGTTTCTGATTCCTCAGAAGAAGCTGGTAAGCGTATCCAGT 828 Query 19000 T 19000 | Sbjct 829 T 829 >seq39135 Length=635 Score = 87.8 bits (96), Expect = 2e-12 Identities = 221/335 (66%), Gaps = 6/335 (2%) Strand=Plus/Minus Query 22777 CGTGGGAAGGTGGTTGGGGTGAACTACAGTGGGCCGTCTGTTGATGTTCAACCGATGGCC 22836 ||||| ||||| || || || | ||| || || | ||||| |||||||| ||||| Sbjct 462 CGTGGCAAGGTTGTAGGTGTAGATTACTCAGGACCTACGGTTGACGTTCAACCTATGGCT 403 Query 22837 TACACAGAGTTCCCTTCTGGAACCAC---AGACCGATACCCGGTTATTTATGATGTCCCC 22893 | |||| ||| ||||| ||| |||| ||||||| || | | |||| || Sbjct 402 AAGACAG---TCCTTTCTGACGGCACTGAAGACGGATACCCTACCATCTTTAATGTTCCG 346 Query 22894 GTCCTGTTGCCGTCAGGCGCAGGGGGTAAGGCCCGCCTGACCATGCCGATTAAGCCCGGC 22953 || | | ||||||| || || ||||| ||||| ||||||||||| ||| || Sbjct 345 GTACAACTACCGTCAGCTAATGGAGGAAAGGCTCGCCTAACCATGCCGATCAAGGTTGGT 286 Query 22954 GACGTGGTAGGTCTATCCTTCTCTGAGCGGAACGAGGGGGACAATAACGATCAGAACACT 23013 || |||| || | |||||| ||| | ||||| | || | ||| || | |||| Sbjct 285 GATATGGTTGGCATTAACTTCTCAGAGAGAAACGAAGATAACTCTTCCGACCAAAGCACT 226 Query 23014 CACCAACTGTTTGCCGGGTGGGCCGTCACCCAGATCTTCACCGATGGCAACTCAAAGGCG 23073 || | |||| || || | || ||||| |||||| ||| | ||| | || | Sbjct 225 CATGGATTGTTCGCAGGTTTCGCTGTCACTGAGATCTACACACCAGAAAACGCTAAACCT 166 Query 23074 ATTCATCCAGACAACGTTGTCTTGGAGAACGATAA 23108 || | || || || || ||| | ||||||||||| Sbjct 165 ATCGACCCTGATAAGGTAGTCCTTGAGAACGATAA 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477081258535840