Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq61286 123 2e-23 seq6559 114 1e-20 seq8074 102 6e-17 seq61987 96.9 3e-15 seq34431 96.9 3e-15 seq6476 89.7 4e-13 >seq61286 Length=444 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| | |||| ||||| ||||| ||||||||||| || | || |||| Sbjct 180 CAATACCAAATGCAACGTGGATTCTTTCTGAATGTTGTAATCAGAAAGCGTGCGGCCGTC 239 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || | ||| ||||||||||| |||| || ||| ||||| | ||| | || ||||| || Sbjct 240 CTCGAGCTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTATC 299 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||| || ||| || | | | || |||||||| || |||| ||| || || Sbjct 300 CTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGT 359 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| ||||| ||||| || ||||||||||| Sbjct 360 CTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 392 >seq6559 Length=1815223 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| | |||| ||||||||||| ||||||||||| || | || |||| Sbjct 1625324 CAAAACCAAATGCAACGTGGATTCTTTTTGAATGTTGTAATCAGAAAGCGTGCGGCCGTC 1625265 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || | ||| |||||||| || |||| || ||| ||||| | ||| | || ||||| || Sbjct 1625264 CTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTATC 1625205 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||| || ||| || | | | || || ||||| ||||||| || || || Sbjct 1625204 CTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGATGCCTCAACCTCCAGTGTGATGGT 1625145 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||| || || ||||| || ||||| ||||| Sbjct 1625144 TTTTCCTGTTAAGGTTTTAACGAAAATTTGCAT 1625112 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 |||| ||| |||| ||| || ||| || || ||||| ||||| ||||| || | || Sbjct 1625785 AGCCTCAAAACCAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGTGTGCGG 1625726 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | ||| ||||| || || |||| || ||| ||||| | ||| | || || Sbjct 1625725 CCGTCCTCGAGCTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCTTCT 1625666 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||| || || ||| | | | || |||||||| || |||| ||| Sbjct 1625665 TTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTGTCAGACGCCTCAACTTCCAACGTG 1625606 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| ||||| || ||||||||||| Sbjct 1625605 ATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 1625568 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||||||| | || || || ||||||||||| ||||| || | ||| | || || Sbjct 1624865 CACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGACCATCCTC 1624806 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 | ||| || |||||||| |||| || |||||| |||| |||| ||| || ||||| Sbjct 1624805 GAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGGTCCGGTGGAATGCCTTCTTTGTCCTG 1624746 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 ||| ||| ||| ||| | | | || || || || ||||||| || || || || Sbjct 1624745 AATTTTTGCTTTGACATTCTCGATTGTGTCCGAAGCTTCAACCTCCAAAGTGATGGTCTT 1624686 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| |||| ||||| || || |||||||| Sbjct 1624685 TCCTGTCAGGGTTTTAACGAAGATCTGCAT 1624656 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 48537 TCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCA 48596 || ||||| || || || | || | || |||||| |||||| ||||| ||||||||| Sbjct 1626025 TCTCCGCCTCTAAGTCGAAGTACAAGGTGAAGCGTGGACTCTTTCTGAATGTTGTAATCA 1625966 Query 48597 GATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTG 48656 || || | || |||| || | ||| |||||||| || || | | ||| ||||| | Sbjct 1625965 GAAAGTGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATTAACCTCTGCTGATCTGGA 1625906 Query 48657 GGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCC 48716 |||| || || ||||| ||| || || || | | | || |||||||| Sbjct 1625905 GGAATACCTTCTTTGTCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCAGACGCCTCA 1625846 Query 48717 ACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| ||| || || ||||| ||||| ||||| || ||||||||||| Sbjct 1625845 ACTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 1625796 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| || ||||| | ||| ||||| ||||| || |||||||| || | ||| | || Sbjct 1625096 CAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAGAGCGTGCGACCATC 1625037 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || | || || |||||||| |||| | || ||||| | ||| | || |||||||| Sbjct 1625036 CTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGGATTCCTTCCTTGTC 1624977 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||| || ||| ||| | | | ||||||||||| || |||| ||| || || Sbjct 1624976 TTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGT 1624917 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| |||||||| || || ||||| ||||| Sbjct 1624916 CTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 1624884 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| || | ||| || ||| || || ||||| ||||| ||||| || | || |||| Sbjct 1625552 CAAAACAAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGACAGTGTGCGGCCGTC 1625493 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || | ||| |||||||| || |||| || ||| ||||| | ||| | || |||||||| Sbjct 1625492 CTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCTTCCTTGTC 1625433 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||| || ||| ||| | | | || || ||||| ||||||| || || || Sbjct 1625432 CTGAATTTTGGCTTTGACATTTTCGATTGTGTCCGAAGCCTCAACCTCCAGTGTGATGGT 1625373 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| ||||| | || || || ||||||||||| Sbjct 1625372 TTTACCCGTGAGCGTCTTGACGAAAATCTGCAT 1625340 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || ||| || || || |||||||| || || | | || |||| || Sbjct 1624636 ACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCTGACAAGGTGCGCCCGTCCTCG 1624577 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || |||| ||||| ||||| | || | ||| || || || | Sbjct 1624576 AGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGGGATGCCTTCTTTATCCTGA 1624517 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| ||| | | | || || || || ||||||| || || || ||| Sbjct 1624516 ATCTTCGCTTTGACATTCTCAATCGTGTCCGAAGCTTCGACCTCCAAAGTGATAGTCTTT 1624457 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||||||||| || || |||||||| Sbjct 1624456 CCTGTCAAAGTTTTAACGAAGATCTGCAT 1624428 >seq8074 Length=2046595 Score = 102 bits (112), Expect = 6e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| || ||||||||||| || ||| | || |||| |||| ||| || ||||| || | Sbjct 637376 CTTTCTGGATATTGTAATCGGAAAGAGTACGTCCGTCCTCCAGCTGTTTGCCGGCGAAGA 637317 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 | |||||||||||||||| |||| ||||||||||| ||||| || ||| Sbjct 637316 TGAGTCGCTGTTGATCCGGCGGAATTCCCTCCTTGTCCTGTATCTTCGCCTTGACATTCT 637257 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | | || || ||||| ||||| | || || || || ||||| | || || || | Sbjct 637256 CGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTCACGA 637197 Query 48757 AAATCTGCATCGTG 48770 | |||||||| ||| Sbjct 637196 AGATCTGCATGGTG 637183 >seq61987 Length=372 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| || ||||| | ||| ||||| ||||| || |||||||| || | ||| | || Sbjct 76 CAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAGAGCGTGCGACCATC 135 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || | || || |||||||| |||| | || ||||| | ||| | || ||||| || Sbjct 136 CTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGGATTCCTTCCTTATC 195 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||| || ||| ||| | | | || |||||||| || |||| ||| || || Sbjct 196 CTGAATTTTGGCTTTGACATTCTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGT 255 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| ||||| ||||| || ||||||||||| Sbjct 256 CTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 288 >seq34431 Length=440 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||||||| ||||| ||||||||| || || || || || ||| ||| | Sbjct 420 AGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCGGAAAGAGTTCTA 361 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || || || |||| ||||||||||||| ||||| ||| || Sbjct 360 CCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGGGGAATGCCTTCT 301 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| |||||| | | | || || || || || || | || Sbjct 300 TTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAACTTCGAGAGTG 241 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || | |||||| || || || ||||| Sbjct 240 ATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 203 >seq6476 Length=10381176 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| ||||| || || || || ||||||||||| ||| ||| | || || Sbjct 5656886 ACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTTCTGCCATCCTCT 5656827 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||| || ||||| |||| || |||||||| | |||| || || ||||| Sbjct 5656826 AGTTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGG 5656767 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| ||| | | || || || || |||||||| | || || |||||| Sbjct 5656766 ATCTTAGCTTTGACATTCTCTATAGTGTCAGAAGCTTCCACCTCGAGGGTGATGGTTTTT 5656707 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | |||||| || || || ||||| Sbjct 5656706 CCAGTAAGAGTTTTCACGAAGATTTGCAT 5656678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380576455441524