Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_019400.1 Length=147940 Score E Sequences producing significant alignments: (Bits) Value seq1985 152 5e-32 seq43336 125 7e-24 >seq1985 Length=318 Score = 152 bits (168), Expect = 5e-32 Identities = 190/261 (73%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 106498 AGGTAAGTGTGCCTCTGGCAACTACGTAGACGTTGTTCGTTTCGGTCACTGGTTGAAATT 106557 |||||| ||| | ||||| || | |||||| | || || ||||||||||| || Sbjct 303 AGGTAAATGTTCTTCTGGTCNGTATGCTGACGTTATCCGCTTNTCCCACTGGTTGAAGTT 244 Query 106558 CCGCACAGAAGAAAGCGTGTTTGGTTACATGTCTCGTCGTTCTAACATGGGTCTCTCCAT 106617 ||| | ||||| || || |||||| | || || ||||||||| | ||||| Sbjct 243 CCGTATGGAAGAGTCAGTATTCTCCTACATGCACCAGCGCTCAAACATGGGTATGTCCAT 184 Query 106618 GAAGATGAGTGATGACGATCTGCCAAACCTGAAGTCTGTGATGATGAACAACCCAATCAA 106677 ||||||||| || || || |||||||||||| ||||||| ||||| | || || || Sbjct 183 GAAGATGAGCGACGATGACTTGCCAAACCTGAGCACTGTGATCCTGAACGATCCTATTAA 124 Query 106678 CGTTGGTATCTCCAATGGTTCAATCCTAACAGGATACGATGACGTTAACAAGGTGTTCTA 106737 ||| ||||| |||||||| ||| |||| ||||| ||||| | |||||||| ||||| Sbjct 123 CGTAGGTATTCGTAATGGTTCCATCTTAACCGGATATGATGAGGAAAACAAGGTCTTCTA 64 Query 106738 CGATCCGGTAATCACAATTCC 106758 ||| || | ||||| ||||| Sbjct 63 CGACCCAATCATCACCATTCC 43 >seq43336 Length=1079 Score = 125 bits (138), Expect = 7e-24 Identities = 296/442 (67%), Gaps = 4/442 (1%) Strand=Plus/Plus Query 93097 ATGATCCTGGAAAACA-ACGCACAAATCCTGATCATTGGGGGTGCGGCGGGGTCAGGTAA 93155 |||||||| ||| || |||| | || || ||||| || ||||| || || ||||| || Sbjct 639 ATGATCCTT-AAATCAGACGCTGAGATTCTAATCATCGGCGGTGCTGCTGGTTCAGGGAA 697 Query 93156 ATCTTACCTGCTTCAATTGATGCCCCTCAACATTATCGACGACCCAAGAACGAACTGCAT 93215 || || |||||||| || ||||| || ||||| |||||||| |||| ||| | Sbjct 698 GTCCTATCTGCTTCAGTTAATGCCTCTGTTTATTATTGACGACCCGCGAACAGCCTGTGT 757 Query 93216 TATGTTCCGTAGAAACACCCCCCAGTTGAAGGGTGGTGGTGGTCTGTATGATACTGCACG 93275 |||||||| || || ||| | ||| |||||||||| ||| | || Sbjct 758 CATGTTCCGCCGATCAGTACCACAGCTACGTGGTCAAGGTGGTCTGTTTGACAAGGCTAA 817 Query 93276 AGGCATCTACACACAGCTTGCTCCTGAATGGAAGCCACGCTTCAGGGAGAAAGACCTTGA 93335 || || || | || || | | | | || ||||| || | ||||| || | || Sbjct 818 AGATATTTATAACCAACTCGATGTCAACTCTAAACCACGATTTCGTGAGAATGAGATGGA 877 Query 93336 GGCAATTTTCCCTTCCGGTGCGAAAGTTAAGTGGTCCCACATGGAATATGAGAAAGATAA 93395 || | ||||| ||| || |||||||||||| ||| | | | || | || Sbjct 878 AGCTTTATTCCCAAACGGGGCTAAAGTTAAGTGGCAGTCGATGCAGCACGTAAAGAACAA 937 Query 93396 GTATTCTCAC-CAGGGTCTGCAATATACCTTTGTCGGGTTTGACGAAGGAACACAGTTTG 93454 | || || ||||| || ||| ||| ||| | || | ||||||| || ||||||| Sbjct 938 GC-TTGACATTCAGGGCCTAGAATTTACTTTTATAGGCGTAGACGAAGCCACCCAGTTTG 996 Query 93455 AATGGTCTCAGATCGAATACCTTATGTCTCGTCTTCGTTCTGAATCCAAATATCCAAGCC 93514 ||||| ||| |||||||| | ||||||||| | ||||| || ||||| || || Sbjct 997 AATGGGAACAGCTCGAATACATGATGTCTCGTTTGCGTTCATCTTCTAAATACCCGTCCC 1056 Query 93515 GTATGGTTATCTCCTGTAACCC 93536 | |||||||| || |||||||| Sbjct 1057 GAATGGTTATGTCATGTAACCC 1078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472819806192000