Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq37339 105 2e-18 >seq37339 Length=736 Score = 105 bits (116), Expect = 2e-18 Identities = 341/520 (66%), Gaps = 16/520 (3%) Strand=Plus/Plus Query 20687 TACGGTCGTATCGACATGGCGAAGTACCAGGTGGCATTGCGCAAGTGCGATAACTTTATC 20746 ||||| ||| | ||| ||| ||| |||||| | |||| ||| |||||| || Sbjct 47 TACGGCCGTGTTGACCTGGAGAAATACCAGACCTCTCTGCGACGTTGCCGTAACTTCATT 106 Query 20747 GTGCGGCAGTATGGCGGCGTTGAGAATCGACCTGGTACGCGTTTTGTCGGTGCCGCCAAA 20806 || || || ||||| ||||| ||||| || || || || || | ||| | |||| |||| Sbjct 107 GTCCGCCAATATGGTGGCGTAGAGAACCGTCCCGGGACACGGTATGTAGC-GCCGGCAAA 165 Query 20807 -TACCCAAATCGGAAATGCCGCCTGATCCCGTTCCAGTTCTCGACGGTTCAGACTTATGC 20865 | || |||| || || ||||||||||||||||||||| || | || || |||| Sbjct 166 GTTTCCCGATCGCAAGTGTCGCCTGATCCCGTTCCAGTTCAACACTGAGCAAACCTATGT 225 Query 20866 TCTGGAGTTCGGACACCAGTACATGCGCGTTATCAAAGATGGTGC----GTTG-GTGCTG 20920 || || | ||| |||| || | ||||| | | ||||| || |||| | || Sbjct 226 GCTCGAAGTTGGAGACCACTATTTCCGCGTGTTTATGGATGGAGCTCAGGTTGTTTACTC 285 Query 20921 AACAG----CAGCAATG--TTATTTAT-GAAATTGCCACGCCATATACTGAAGCCGATCT 20973 | | | |||| || | | || | || ||||||| ||| | |||| | Sbjct 286 ATCTGGTGCCAGCGCTGGCCAACCGGTAGATGTGGCAACGCCATGGGCTGCTGGCGATAT 345 Query 20974 -GTTCCGAATTAAATTCACGCAAAGCGCTGACGTGCTTACGCTGGTTCACCCGGCATACC 21032 | || | | || | |||||||||||| |||||| | ||| | |||||| |||| Sbjct 346 CGATCTG-CTGAAGTACACGCAAAGCGCGGACGTGATGACGGTCTGTCACCCCAATTACC 404 Query 21033 CGCCGAAAGAGTTGCGGCGCTATGCGCATGACAACTGGCAACTTGTTGATGTGGTAACGA 21092 |||||| ||| | | || || || |||||| | |||| | | ||||| ||| Sbjct 405 CGCCGATGGAGATCCAACGATACGCACATGACGATTGGCGTACCGCAGTCGTGGTTACGG 464 Query 21093 AGAACGGGCCATTTGAAGATATCAATATTGACGAGTCAGTGACGGTTTATGCCAGCGCCA 21152 | ||| ||||| | | |||| ||||| ||| || | || || || |||||||| | Sbjct 465 TCAGCGGCCCATTCGCCAACGTCAACATTGATGAGGCAATTACCGTATACGCCAGCGCAA 524 Query 21153 GCACCGGGACAATTACGTTAACGGCAAACGCCTCTATTTT 21192 | ||| || | ||||| ||| | | ||| || || || Sbjct 525 CGAGCGGCACGGTAACGTTGACGTCCAGCGCGTCAATATT 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143054933329776