Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6588 102 2e-16 seq6487 100 5e-16 >seq6588 Length=2622284 Score = 102 bits (112), Expect = 2e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 |||||||| ||| || || ||||| |||| | |||||| || || |||||||| ||||| Sbjct 579222 CTTGAGCAGCTTGACCTTGTCCTCGAGCCTGGAGATGCGCTCGAGCTTGCGCCGTCGGCA 579163 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 |||| || |||| |||||||| | | ||| | ||| |||||| ||||||| Sbjct 579162 CTTGGACGCGGCCACGCGGTTCCTCTGCCGCTTCCTCTCCAGCTTGATCTTCTCCTGGTT 579103 Query 241609 CTCCATGTCGATCGGAGAC 241627 ||||||||||||||| ||| Sbjct 579102 CTCCATGTCGATCGGCGAC 579084 >seq6487 Length=3923646 Score = 100 bits (110), Expect = 5e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 213500 GTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCT 213559 |||||||||||| |||||| || | | |||||| | ||||||||| |||| |||||| Sbjct 1175660 GTTGCAAACGGCGACCTCCCCAGGACCGGAGTACTCAACGATCTCGGTACACAAGTTGCT 1175719 Query 213560 GCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAG 213619 |||| ||| ||||| | | ||| || || || ||| ||| | ||| ||||| || Sbjct 1175720 GCATTTGATAGTGCCGATATGCTGATGATTCGATTTTCGATTGCAATGATCTTTGTAAAG 1175779 Query 213620 CATGTAGGGGGACCCGGTCTCTAGCTGGGA 213649 ||| || || | ||||||||||| ||||| Sbjct 1175780 CATATAAGGTGTCCCGGTCTCTACTTGGGA 1175809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930627024081920