Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_019530.1 Length=157785 Score E Sequences producing significant alignments: (Bits) Value seq2061 324 1e-83 seq2042 174 2e-38 >seq2061 Length=505 Score = 324 bits (358), Expect = 1e-83 Identities = 340/446 (76%), Gaps = 6/446 (1%) Strand=Plus/Plus Query 107928 CATTTTTATGAAGCAGCAACGATGCC---GCCACCGGATTCGATTTCGCTGAACTCCATA 107984 |||| |||||| || || |||||||| |||||| ||| | |||| |||| | || Sbjct 32 CATTGTTATGACGCGGCCACGATGCCCATGCCACC---TTCCACTTCGGAGAACGCAATG 88 Query 107985 TCCGGTCGAACTGCAGCAAAATCCAAATAAATCCAGTTAATGCTGTACTCAGGCTTCAAC 108044 ||||| || || || || ||||| | || |||||||| |||||||| || || |||| | Sbjct 89 TCCGGACGGACGGCTGCGAAATCGAGGTAGATCCAGTTGATGCTGTATTCTGGTTTCAGC 148 Query 108045 CAGATACCAGCAACCATTTGGTTCGCTGCAATGACATCAGCAGTGTTGTTATCTTCATCA 108104 |||||||| || | ||||||||| || || | || ||| | |||||| ||||| ||| Sbjct 149 CAGATACCTGCGATCATTTGGTTGGCGGCTACAACCGAAGCCGGGTTGTTGTCTTCGTCA 208 Query 108105 CACTTGACTTTACCATCGTAAATCGCGCCCATATTTGCCAGCTGGCGGATATATGGACGA 108164 || ||||| ||||||||| || || ||||| ||||||||| | |||||| Sbjct 209 CATTTGACCTTACCATCGACGATTGCACCCATGCCGATCAGCTGGCGAACATATGGGGTG 268 Query 108165 ACCGCATTGCTGAACAGACCACGTGTAAACGCGTCATTGTTCTCACCAAGATAGTATTTA 108224 ||||| ||| |||||| || |||||||| || || ||||| || || ||||||||| Sbjct 269 ACCGCGTTGGTGAACAACTGGCGCGTAAACGCATCGTTATTCTCGCCCAGGTAGTATTTA 328 Query 108225 GCGATTGCGGCGATGTTCTGCTCAGCCATGATGAACAGGCCACGAACGTTGATGCGATCA 108284 || || || | |||||| |||||||||||| || ||||| ||||||||||| || Sbjct 329 GCAATGGCAGAGATGTTGGTCTCAGCCATGATAAAAGTACCACGGACGTTGATGCGGTCG 388 Query 108285 AACGCCGACGGGCGGGTCAGGCCAGTTTTGTCACCATACAGGACGATGCCTTCATTGGAG 108344 ||||| |||||||||||||| ||||||||||| |||| |||||||||||| ||| | Sbjct 389 AACGCACTTGGGCGGGTCAGGCCGGTTTTGTCACCGTACAACACGATGCCTTCAGTGGTG 448 Query 108345 AAGGTTACGATGCTGTTGATCTGATT 108370 ||||| ||||||||||||||||| || Sbjct 449 AAGGTAACGATGCTGTTGATCTGGTT 474 >seq2042 Length=482 Score = 174 bits (192), Expect = 2e-38 Identities = 216/296 (73%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 105622 CGGCTCTTAGGGATCATTAGAGCATCATAGAGTTTTTCACGGAAATAGTTCACGTGATCC 105681 ||||||||||| ||| | |||||| | || || || ||||| || ||||| |||||| Sbjct 187 CGGCTCTTAGGAATCTTGAGAGCACCGTACAGCTTGCTGCGGAAGTAATTCACATGATCC 246 Query 105682 ATTTCGCCCAATTGATTCCCACCCCCAACAGTCGCAATCTCTGTAGCATTCTGACCTTCG 105741 |||| ||||| || | || || || | || || || || || ||||| || || Sbjct 247 ATTTGGCCCAGCTGGTCACCGCCACCGATGGTGCTTATTTCGGTCGCGTTCTGTCCCTCA 306 Query 105742 CGGCGCGGCAACCAATAATCCTCTGCAATACCCATAAGATGGGCATTACCTGTTATCTTA 105801 || || |||| ||| || ||||| || |||||||| || || | | ||| || ||| Sbjct 307 CGACGTGGCATCCAGTAGTCCTCAGCGATACCCATGAGGTGAGTGTCGCCTTGTACCTTG 366 Query 105802 CCAGTGGTGCGGTCATATGCGTTGCGGTTTTTGAATTTACCCATCATCATGGTCATGTAT 105861 || || |||| ||||| | ||| || || || ||||||||||||| ||| || Sbjct 367 CCGGTCTGACGGTTATATGACAGGTTGTTCTTAAACTTGCCCATCATCATGGCCATATAC 426 Query 105862 TCTTCAGCAGATTTCTTACCGAGAGTACCGACGTCAAGATAGAATGCGCGTTTCTC 105917 |||||||| ||||||||||| | ||||||||||||| ||||||||||| ||||| Sbjct 427 TCTTCAGCGGATTTCTTACCCAACATACCGACGTCAAGGTAGAATGCGCGCTTCTC 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504293173277600