Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq2061 288 1e-72 seq2042 228 8e-55 seq3161 98.7 1e-15 >seq2061 Length=505 Score = 288 bits (318), Expect = 1e-72 Identities = 344/473 (73%), Gaps = 3/473 (1%) Strand=Plus/Minus Query 18414 AACCAGATCAACAGCATCGTCACCTTCTTCAACGAAGGCATTGTGCTGTACGGCGACAAG 18473 |||||||||||||||||||| |||||| || |||||||| ||| ||||||| ||||| Sbjct 474 AACCAGATCAACAGCATCGTTACCTTCACCACTGAAGGCATCGTGTTGTACGGTGACAAA 415 Query 18474 ACTGGTCTGACTCGTCCGTCTGCGTTTGACCGCATCAACGTTCGTGGCCTGTTCATCATG 18533 || || ||||| || || |||||| |||||||||||||| ||||| || |||||| Sbjct 414 ACCGGCCTGACCCGCCCAAGTGCGTTCGACCGCATCAACGTCCGTGGTACTTTTATCATG 355 Query 18534 GCCGAGCAGAACATCGCTGCAATCGCCAAATACTACCTTGGTGAGAACAACGATGAATTC 18593 || ||| |||||| |||| || || ||||||||||| || ||||| ||||||| || Sbjct 354 GCTGAGACCAACATCTCTGCCATTGCTAAATACTACCTGGGCGAGAATAACGATGCGTTT 295 Query 18594 ACTCGTAGCCTGTTCAGCAACGCTGTACGCCCGTATATCCGCCAGCTGGCCAACATGGGT 18653 || || |||||| |||||| || ||| ||| | ||||||||| | ||||||| Sbjct 294 ACGCGCCAGTTGTTCACCAACGCGGTCACCCCATATGTTCGCCAGCTGATCGGCATGGGT 235 Query 18654 GCGATCTACGATGGTCAGGTGAAGTGCGACGCCNNNNNNNNNNNNNNNNNNNNNNNNGCT 18713 || ||| ||||||| |||| || || |||| || Sbjct 234 GCAATCGTCGATGGTAAGGTCAAATGTGACGAAGACAACAACCCGGCTTCGGTTGTAGCC 175 Query 18714 GCGAACCAGATGGTTGCGGGTATCTGGCTGAAACCAGAATACTCAATAAATTGGATCTAC 18773 || ||||| ||| | || |||||||||||||||||||||||| || || ||||||||| Sbjct 174 GCCAACCAAATGATCGCAGGTATCTGGCTGAAACCAGAATACAGCATCAACTGGATCTAC 115 Query 18774 TTAGATTTCGCCGCCGTTCGACCAGACATGGAATTTAGCGAAGTCGAAACTGGTGGTGGT 18833 | |||||||| ||||| || || ||||| | || |||||| ||| ||| || Sbjct 114 CTCGATTTCGCAGCCGTCCGTCCGGACATTGCGTTCTCCGAAGTGGAAGGTGGCATGGGC 55 Query 18834 ATCGTCGCCGCGTCCTAATCTACTTTCATGCCCTCTTCAGAGGGCATTTCAAT 18886 ||||| |||||||| ||| | | | |||||||||| |||||||||||||| Sbjct 54 ATCGTGGCCGCGTCATAA-CAA--TGTGTGCCCTCTTCGGAGGGCATTTCAAT 5 >seq2042 Length=482 Score = 228 bits (252), Expect = 8e-55 Identities = 327/458 (71%), Gaps = 7/458 (2%) Strand=Plus/Minus Query 21130 GAGAAGCGAGCGTTCTATCTCGACGTGGGTACGCTGGGTAAAAAGTCGGCCGAAGAATAC 21189 |||||||| || ||||| || ||||| |||| | ||||||| || || || ||||| || Sbjct 482 GAGAAGCGCGCATTCTACCTTGACGTCGGTATGTTGGGTAAGAAATCCGCTGAAGAGTAT 423 Query 21190 ATG--CAAGCCATGATGGGTAAATTCAAGAACCGTCTGGCGTATGATCGCACCACTGGTA 21247 ||| || | |||||||| || || |||||| ||| | ||| | || || || | Sbjct 422 ATGGCCATG--ATGATGGGCAAGTTTAAGAACAACCTGTCATATAACCGTCAGACCGGCA 365 Query 21248 AAGTGGCAGGCAATACTCATCTGATGGGTATCGCTGAAGACTACTGGTTGCCGCGCCGCG 21307 | || |||| | ||||| || |||||||||||||| ||||||||| |||| || || | Sbjct 364 AGGTACAAGGCGACACTCACCTCATGGGTATCGCTGAGGACTACTGGATGCCACGTCGTG 305 Query 21308 AAGGGCAGAACGCAACGGAGATATCCAACGTAGGTGGCGGCGATCAACTGGGTCAAATGG 21367 | || |||||||| || || ||| || | | |||||||| || || ||||| ||||||| Sbjct 304 AGGGACAGAACGCGACCGAAATAAGCACCATCGGTGGCGGTGACCAGCTGGGCCAAATGG 245 Query 21368 ATCATGTGGTATACTTCCGCGAGAAGCTCTACGAGGCTCTGATGATCCCTAAAAGCCGCC 21427 |||||||| ||||||||| ||||| |||| ||||| | ||| ||||| ||||| Sbjct 244 ATCATGTGAATTACTTCCGCAGCAAGCTGTACGGTGCTCTCAAGATTCCTAAGAGCCGAT 185 Query 21428 TCCAAGA---GGAAGGTTCCATCAACATCGGTGGTTCCAATCTTGCCGAAATCACCCAGG 21484 | | || | || |||||| ||||| || |||| | ||| | || | | Sbjct 184 TGGATGACGGTGGCGGCAACATCAATATCGGCGGGAGTGATCTCGGTGAAGTAACTCGTG 125 Query 21485 AAGAACTGCGCTTCAACAAATTCTGCGCAGGCCTGCGCCGTCGTTATTCAGGATTCTTCC 21544 | || |||||||| || ||||| || | |||||||| || || ||| ||||| Sbjct 124 ATGAGAATCGCTTCAAGAAGTTCTGTGCTCGTCTGCGCCGCCGGTACTCACTCATCTTCT 65 Query 21545 TTGAACTTCTTCGTCGTCAGCTGATCCTGAAGAACATC 21582 | | || |||||||| ||| ||||| |||| || ||| Sbjct 64 TGGGCCTGCTTCGTCGACAGTTGATCATGAAAAAGATC 27 >seq3161 Length=466 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/151 (75%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 36550 TCTGTATCAGACTTGCCATATCCTTCATAAGTATGGCAAGTATTATATCGTTCACTTCAA 36609 |||||||||||| ||||||||| || || |||||||| |||||||||||||| Sbjct 266 TCTGTATCAGACCTGCCATATCACCCAGCGCGGCGGGAAGTATTACATCGTTCACTTCAA 325 Query 36610 GCATCTGTTTATGCTGGACGGGCATTACAACGGGTTTAACCGTGAAGATGTCCTGAGGAT 36669 ||| | | |||| | || |||| | ||||| || ||| |||||| ||||| | || Sbjct 326 GCACTTCTATATGTTTGAGGGGCGTCGTAACGGATTGTGCCGGGAAGATATCCTGCGCAT 385 Query 36670 GAACCG-CATCATCAAGCTGCTTGAGCAGTG 36699 |||||| ||| ||| ||||| |||||||| Sbjct 386 GAACCGTCATTATCCGCCTGCTAGAGCAGTG 416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510172251192320