Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_019925.1 Length=152427 Score E Sequences producing significant alignments: (Bits) Value seq2061 316 2e-81 seq2042 221 1e-52 seq3161 96.9 3e-15 >seq2061 Length=505 Score = 316 bits (350), Expect = 2e-81 Identities = 337/444 (76%), Gaps = 3/444 (1%) Strand=Plus/Plus Query 104939 TTGTTATCAGGAGGCCGCGACGATACCACCACCAGTTTCGACTTCGCTAAATTCCATATC 104998 ||||||| | | |||| ||||| || ||| ||| |||||| || | || || Sbjct 34 TTGTTATGACGCGGCC---ACGATGCCCATGCCACCTTCCACTTCGGAGAACGCAATGTC 90 Query 104999 TGGGCGAACGGCGGCGAAATCAAGATACACCCAGTTAATGCTGTATTCAGGCTTGAGCCA 105058 || || ||||| |||||||| || || | |||||| ||||||||||| || || ||||| Sbjct 91 CGGACGGACGGCTGCGAAATCGAGGTAGATCCAGTTGATGCTGTATTCTGGTTTCAGCCA 150 Query 105059 GATACCCGCAACCATCTGGTTCGCAGCGATGATATCGGCAGTGTTGTTGTCTGCATCACA 105118 |||||| || | ||| ||||| || || | | || | |||||||||| | ||||| Sbjct 151 GATACCTGCGATCATTTGGTTGGCGGCTACAACCGAAGCCGGGTTGTTGTCTTCGTCACA 210 Query 105119 CTTGACAGTACCGTCATAGATCGCGCCCATGTTGGTCAGCTGACGCAGATACGGACGCAC 105178 ||||| |||| || ||| || |||||| | ||||||| || | ||| || || Sbjct 211 TTTGACCTTACCATCGACGATTGCACCCATGCCGATCAGCTGGCGAACATATGGGGTGAC 270 Query 105179 CGCGTTGCTGAACAGGCTGCGAGTGAACTCATCGTTGTTCTCACCAAGGTAGTATTTGGC 105238 ||||||| |||||| ||| || ||| ||||||| ||||| || ||||||||||| || Sbjct 271 CGCGTTGGTGAACAACTGGCGCGTAAACGCATCGTTATTCTCGCCCAGGTAGTATTTAGC 330 Query 105239 GATTGCAGCGATGTTCTGCTCGGCCATGATGAACAGGCCACGAACGTTGATGCGGTCGAA 105298 || |||| |||||| ||| |||||||| || ||||| ||||||||||||||||| Sbjct 331 AATGGCAGAGATGTTGGTCTCAGCCATGATAAAAGTACCACGGACGTTGATGCGGTCGAA 390 Query 105299 CGCAGATGGGCGGGTCAGGCCAGTCTTGTCCCCGTACAGCACGATGCCTTCGTTGGAGAA 105358 |||| ||||||||||||||| || ||||| ||||||| |||||||||||| ||| ||| Sbjct 391 CGCACTTGGGCGGGTCAGGCCGGTTTTGTCACCGTACAACACGATGCCTTCAGTGGTGAA 450 Query 105359 AGTGACGATGCTGTTGATCTGGTT 105382 || |||||||||||||||||||| Sbjct 451 GGTAACGATGCTGTTGATCTGGTT 474 >seq2042 Length=482 Score = 221 bits (244), Expect = 1e-52 Identities = 323/456 (71%), Gaps = 3/456 (1%) Strand=Plus/Plus Query 100908 GATGTTCTTCAGGATCAACTGACGGCGAAGAAGTTCAAGGAAGAATCCTGAATAACGACG 100967 ||| || |||| ||||||||| || ||||| || | | ||||| ||| || || || Sbjct 27 GATCTTTTTCATGATCAACTGTCGACGAAGCAGGCCCAAGAAGATGAGTGAGTACCGGCG 86 Query 100968 ACGCAAGCCTGCGCAGAATTTATTGAAGCGCAGTTCTTCCTGAGTGATTTCAGCAAGGTT 101027 |||| | || ||||| || |||||||| || || |||| | |||| | || | Sbjct 87 GCGCAGACGAGCACAGAACTTCTTGAAGCGATTCTCATCACGAGTTACTTCACCGAGATC 146 Query 101028 GGAACCACCGATGTTGATAGAACCTTCC---TCTTGGAGACGGCTCTTAGGGATCATCAG 101084 || ||||| ||||| || | || | | ||||||||||| ||| | || Sbjct 147 ACTCCCGCCGATATTGATGTTGCCGCCACCGTCATCCAATCGGCTCTTAGGAATCTTGAG 206 Query 101085 AGCCTCATAGAGCTTCTCACGGAAGTATACCACATGATCCATTTGACCCAGCTGATCGCC 101144 ||| | || ||||| |||||||| ||||||||||||||| |||||||| || || Sbjct 207 AGCACCGTACAGCTTGCTGCGGAAGTAATTCACATGATCCATTTGGCCCAGCTGGTCACC 266 Query 101145 ACCGCCTACGTTGGAGATCTCCGTTGCGTTATTCCCTTCACGACGTGGCAACCAGTAGTC 101204 || || | | || || || || ||||| | || ||||||||||||| ||||||||| Sbjct 267 GCCACCGATGGTGCTTATTTCGGTCGCGTTCTGTCCCTCACGACGTGGCATCCAGTAGTC 326 Query 101205 TTCGGCGATACCCATCAGATGAGTGTTGCCTGCCACTTTACCAGTGGTGCGGTCATACGC 101264 || ||||||||||| || ||||||| |||| || || || || |||| ||| | Sbjct 327 CTCAGCGATACCCATGAGGTGAGTGTCGCCTTGTACCTTGCCGGTCTGACGGTTATATGA 386 Query 101265 CAGACGGTTCTTGAATTTACCCATCATCGCCTGCATATACTCTTCCGCAGACTTCTTGCC 101324 ||| |||||| || || ||||||||| |||||||||||| || || ||||| || Sbjct 387 CAGGTTGTTCTTAAACTTGCCCATCATCATGGCCATATACTCTTCAGCGGATTTCTTACC 446 Query 101325 CAGAGTACCCACGTCGAGATAGAACGCTCGCTTCTC 101360 || |||| ||||| || ||||| || |||||||| Sbjct 447 CAACATACCGACGTCAAGGTAGAATGCGCGCTTCTC 482 >seq3161 Length=466 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/190 (72%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 83820 TCGGTGACCTGCTCAGGATGAATGACCTTCACCATGTTCCACTGCTCAAGCAGCTTGATA 83879 || |||| ||| |||||||| ||| | |||| |||||||| ||||| |||| Sbjct 455 TCAGTGATCTGTTCAGGATGCTTGATACGAATCATGCCACACTGCTCTAGCAGGCGGATA 396 Query 83880 AT-ACGATTCATTCGCAGGATGTCCTCACGGTTGAAGCCGTTGTAATGGCCATCCAGCAT 83938 || ||| ||||| |||||||| || || ||| || ||||| | | || || | ||| Sbjct 395 ATGACGGTTCATGCGCAGGATATCTTCCCGGCACAATCCGTTACGACGCCCCTCAAACAT 336 Query 83939 GAACAAATGCTTGAAGTGAACGATATAATACTTGCCATACTTATGAAGAATATGGCAAGT 83998 | || ||||||||||||||||| |||||||| || || |||||||| || Sbjct 335 ATAGAAGTGCTTGAAGTGAACGATGTAATACTTCCCGCCGCGCTGGGTGATATGGCAGGT 276 Query 83999 CTGATACAGA 84008 |||||||||| Sbjct 275 CTGATACAGA 266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487164244801760