Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_020201.1 Length=142349 Score E Sequences producing significant alignments: (Bits) Value seq1998 246 3e-60 seq43336 196 4e-45 seq1985 185 8e-42 seq37382 174 1e-38 seq37342 123 2e-23 seq39135 100 3e-16 seq1991 98.7 9e-16 >seq1998 Length=468 Score = 246 bits (272), Expect = 3e-60 Identities = 295/401 (74%), Gaps = 0/401 (0%) Strand=Plus/Minus Query 111514 GGTGTGTCGCCGCTGGTCGGATGCTACCGTGCGTGGCGTGAAAAGATTCTGATTGAGAAC 111573 ||||| || || || || || || ||||| || | || |||||| |||| ||||||||| Sbjct 402 GGTGTTTCACCTCTAGTTGGTTGTTACCGCGCTTTCCGAGAAAAGGTTCTTATTGAGAAC 343 Query 111574 CTGGAAGTTGTTGGTGCGACAAAAGATATGGGCGGTGTGATCGAATTGAAGATCCCTTCC 111633 ||||||| | || || || || || | ||||| | || || | ||||| |||||| Sbjct 342 TTGGAAGTCATCGGGGCAACTAAGGACCTCGGCGGGATCATTGAGCTTAAGATTCCTTCC 283 Query 111634 CAGATCCTGAACAAGGCTGCAATGGACCCATCTTCTCCGGAAGCTGACATGGTTCGTGGC 111693 ||||| |||||||| ||||| ||| | || |||||||| |||||| || Sbjct 282 AGTATCCTTAACAAGGCAGCAATCGACAAGAATAGCCCAGAAGCTGAAATGGTTGAAGGA 223 Query 111694 CTGATGTCTGACGCAGCCAATGCCCACTCCGGTGAGCAGTCATTCTTCATGCTGCCGTCC 111753 ||||| || || || || |||||| | ||||||||| | ||||||||| ||||||| Sbjct 222 TTGATGCAGGATGCGGCTAACGCCCACGCAGGTGAGCAGGCCTTCTTCATGTTGCCGTCA 163 Query 111754 GATACAAAGGACAACGCCCCTCAATACTCAATGACCCTCAAGGGCATCGACGGGATGGGC 111813 |||| ||||| |||||||| || ||| ||||| || || || ||||| || || Sbjct 162 GATATGAAGGAAAACGCCCCAGCATTCTCCATGACACTTAAAGGTATCGAAGGTTCCGGT 103 Query 111814 AAGCAGTACAGCACCGCACAGTTGATCAGTGACCGTAAGAAGTCAATCCTCGATCGTCTG 111873 |||||||| ||||| || | |||||||| ||||||||||| ||| | || || | Sbjct 102 AAGCAGTATAGCACTTCAGCCCTAATCAGTGAACGTAAGAAGTCTATCTTGGACCGCTTC 43 Query 111874 GGTGCTGGCTTTATCAACGTGGGTAACGACAAGGGCGGTTC 111914 || ||||||||||| ||||| ||||| ||||| |||||||| Sbjct 42 GGCGCTGGCTTTATGAACGTAGGTAATGACAAAGGCGGTTC 2 >seq43336 Length=1079 Score = 196 bits (216), Expect = 4e-45 Identities = 271/376 (72%), Gaps = 4/376 (1%) Strand=Plus/Plus Query 108361 GCTACGTTCGCACCAGCAAGCCGTAAGCAACAGATGGTTCTCGAATCTAAAGCACAGATC 108420 || |||||||| || || || ||| ||||||||| | || |||| | || |||| Sbjct 606 GCCACGTTCGCTCCCGCCAGTATTAAACAACAGATGATCCTTAAATCAGACGCTGAGATT 665 Query 108421 CTCGTGATGGGTGGCGCAGCAGGTTCAGGTAAATCTTACCTGCTCCAGTTGATGCCTCTC 108480 || | || || || || || |||||||| || || || ||||| ||||| |||||||| Sbjct 666 CTAATCATCGGCGGTGCTGCTGGTTCAGGGAAGTCCTATCTGCTTCAGTTAATGCCTCTG 725 Query 108481 CTGATCGTAGACGATCCACGTACAGCCTGCATCATGTTCCGCCGTACAGTGCCCCAGATT 108540 | || | ||||| || || |||||||| ||||||||||||| |||| || ||| | Sbjct 726 TTTATTATTGACGACCCGCGAACAGCCTGTGTCATGTTCCGCCGATCAGTACCACAGCTA 785 Query 108541 CGTGGTCAGGGCGGTCTGTTCGACAAGGCGAAAGATATTTACAATCAGCT--TCCTCCGG 108598 |||||||| || |||||||| |||||||| ||||||||||| || || || || Sbjct 786 CGTGGTCAAGGTGGTCTGTTTGACAAGGCTAAAGATATTTATAACCAACTCGATGTCAAC 845 Query 108599 TCGTCAAGCCCAAGTTCAAAGAGAACGAGATGATTGCGACCTTCCCTAATGGGGCAACGG 108658 || | || | | | ||| ||||| |||||| || ||||| || ||||| | | Sbjct 846 TC-TAAACCACGATTTC-GTGAGAATGAGATGGAAGCTTTATTCCCAAACGGGGCTAAAG 903 Query 108659 TGAAGTGGCAGTCTATGCAGCACGTTAATGATAAATATAACATTCAAGGGTTGGAGTTTA 108718 | ||||||||||| ||||||||||| || | || | ||||||| || | || |||| Sbjct 904 TTAAGTGGCAGTCGATGCAGCACGTAAAGAACAAGCTTGACATTCAGGGCCTAGAATTTA 963 Query 108719 CATTTATCGGTGTGGA 108734 | ||||| || || || Sbjct 964 CTTTTATAGGCGTAGA 979 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 109705 GAAGGTACACAGTTTGACTGGGGGCAGCTTGAGTACATGATGTCGCGTTTGCGATCAAAC 109764 |||| || |||||||| |||| ||||| || ||||||||||| |||||||| ||| Sbjct 981 GAAGCCACCCAGTTTGAATGGGAACAGCTCGAATACATGATGTCTCGTTTGCGTTCATCT 1040 Query 109765 TCAAAATACCCTTCCCGCATGGTTGTATCCTGTAACCC 109802 || |||||||| ||||| |||||| | || |||||||| Sbjct 1041 TCTAAATACCCGTCCCGAATGGTTATGTCATGTAACCC 1078 >seq1985 Length=318 Score = 185 bits (204), Expect = 8e-42 Identities = 202/269 (75%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 124216 GGTAAAACTTCTTCCGGTCAGTACGTTGACGTGATTCGTTTCTCCCACTGGGTGAAATTC 124275 |||||| |||||| |||| ||| | |||||| || || || ||||||||| |||| ||| Sbjct 302 GGTAAATGTTCTTCTGGTCNGTATGCTGACGTTATCCGCTTNTCCCACTGGTTGAAGTTC 243 Query 124276 CGTATGGAAGAGTCCGTATTCGCGTACATGAAACGGCGTTCTGACATGGGTCTGTCCATG 124335 |||||||||||||| |||||| | |||||| | | ||| || |||||||| |||||||| Sbjct 242 CGTATGGAAGAGTCAGTATTCTCCTACATGCACCAGCGCTCAAACATGGGTATGTCCATG 183 Query 124336 AAGATGAGCGACGAAGACCTTCCTGTTCTGAAGTCTGTACTGATGAACAACCCGATCAAC 124395 |||||||||||||| ||| | || |||| |||| | ||||| | || || ||| Sbjct 182 AAGATGAGCGACGATGACTTGCCAAACCTGAGCACTGTGATCCTGAACGATCCTATTAAC 123 Query 124396 ATCGGTATTCGTAATGGCGGTATCCTGACTGGCTATGACACTGAGAACAAAGTGTCTTAT 124455 | |||||||||||||| ||| | || || ||||| || ||||| || | || Sbjct 122 GTAGGTATTCGTAATGGTTCCATCTTAACCGGATATGATGAGGAAAACAAGGTCTTCTAC 63 Query 124456 GACCCGACGATCATTATTCCGAAACGCGC 124484 ||||| | |||| ||||| ||||| || Sbjct 62 GACCCAATCATCACCATTCCAAAACGAGC 34 >seq37382 Length=576 Score = 174 bits (192), Expect = 1e-38 Identities = 312/454 (69%), Gaps = 4/454 (1%) Strand=Plus/Minus Query 15647 CCAATCTTTACTCCGGCACCAAGGAAGTAACCTTCCCCTTTACGACGCCCGAGTGTTAAC 15706 || || ||||| || ||||||| ||||||||| || || |||| || || || || | Sbjct 516 CCCATTTTTACACCAGCACCAATGAAGTAACCCTCACCGATACGTCGGCCCAGAGTCTTC 457 Query 15707 TTGGTCATTGTGGGCCAAGGCCATGACTTGCCCAACACAGGGACCTCGTGAGCCTTGTCT 15766 |||||||| || ||||||||||| | |||||| ||||||| ||| ||||| || Sbjct 456 TTGGTCATGGTAGGCCAAGGCCACGGACGGCCCAAGACAGGGATCTCTTGAGCTTTAGTA 397 Query 15767 CGGAACTGTGCATAAGTTGCAAAGCCTTCCGGGACATAAGCCTTCGGTTTCATCGCTGCC 15826 |||| ||| |||| ||| || || || |||| || | | |||||||| || | Sbjct 396 CGGATCTGCTCATAGGTTCGGAAACCGTCAGGGATGTACTCGATAGGTTTCATGATTGAC 337 Query 15827 CAGAAAAGTTGCTGAGCCAATCCCTTGGTGTACATGTCGCAAGGGTCCATATCTTCAGGG 15886 ||||| | || | ||||| || | | |||||| || || || ||| |||| || || Sbjct 336 CAGAACAACTGGTTAGCCATACCTTCGCCGTACATATCACACGGATCCTTATCATCTGGC 277 Query 15887 ATATCGACAACCTTCATTTGTGGAAGGATGGAATACACCGCCGCCACTGCGTCTTTGCCC 15946 | || | || ||| || |||| | ||||| ||| || ||| ||||| || Sbjct 276 AGGTCAGCTACACGCATCTGAGGAATAAGAGAATAAACCTGAGCTGTTGCCTCTTTACCT 217 Query 15947 TTCATGATACCCTTCGCCTTCTCAGACTCGGTGGCCCGGTCGGCGTCGAACGCCACAAT- 16005 || || ||||||| | |||||| | || || ||| || || || || |||||| Sbjct 216 TTGATAATACCCTGCTGCTTCTCCGCATCAGTTGCCTTATCCGCATCAAA--ACACAATA 159 Query 16006 -GATCTCCTCGAACTTGCTCAGGAGTTTGTAGTTGTTCTTCTGCGCCAAGTTCTGCACAG 16064 ||||| ||| ||| || ||| ||| |||||||| ||||||| | |||| Sbjct 158 CGATCTGTTCGTGCTTCTCCACATATTTAAGGTTCTTCTTCTGGCCCAAGTTACGGACAG 99 Query 16065 CATTGGAGGTGCCGTTGGAGATGGACACCACCGT 16098 ||||||| ||||||||||| | ||| | ||||| Sbjct 98 CATTGGAAGTGCCGTTGGATACGGAGATTACCGT 65 >seq37342 Length=498 Score = 123 bits (136), Expect = 2e-23 Identities = 163/219 (74%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 117885 TGGGAAGACCTCGGCGCGTTCCAAGGCCCTGTCGGTGACACCGGAGCCACTGGCCCAGCA 117944 ||||||||| | || | |||||||||||| || |||| || | ||||||||||| Sbjct 282 TGGGAAGACTTAGGTTCATTCCAAGGCCCTAAAGGAGACAAGGGCGATACTGGCCCAGCG 341 Query 117945 GGACCTAAAGGCGACACTGGCGCACAAGGC-CCGACTGGTAAGGACAACTACGCCCTTGC 118003 || ||||| ||||||||||| ||||| ||| ||| |||||| ||| | ||| || Sbjct 342 GGTGTAAAAGGTGACACTGGCGCTAAAGGCGAAGAC-GGTCAGGACATCTATGACCTAGC 400 Query 118004 GGTAGAGAACGGTTTCGTAGGCTCCCTGAAC-GAATACCTCGCCTCACTGAAAGGTGCGA 118062 || ||||| |||||| ||| | | | | |||||||||||||| || ||||| || | Sbjct 401 TGTTGAGAATGGTTTC-AAGGGTACAAAACCTGAATACCTCGCCTCTCTTAAAGGAGCTA 459 Query 118063 AGGGTGACACTG--GCCCAACTGGTCCTCGTGGTAACAC 118099 | ||||| |||| |||||| || || ||||||| ||| Sbjct 460 AAGGTGATACTGGTGCCCAA--GGCCCACGTGGTATCAC 496 >seq39135 Length=635 Score = 100 bits (110), Expect = 3e-16 Identities = 224/335 (67%), Gaps = 6/335 (2%) Strand=Plus/Minus Query 131928 CGTGGGAAGGTGGTTGGGGTGAACTACAGTGGGCCGTCTGTCGATGTTCAACCGATGGCC 131987 ||||| ||||| || || || | ||| || || | || || |||||||| ||||| Sbjct 462 CGTGGCAAGGTTGTAGGTGTAGATTACTCAGGACCTACGGTTGACGTTCAACCTATGGCT 403 Query 131988 TACACAGAGTTCCCTTCTGGAACCAC---AGACAGATACCCGGTGATTTATGATGTTCCC 132044 | |||| ||| ||||| ||| |||| ||||||| || | | ||||||| Sbjct 402 AAGACAG---TCCTTTCTGACGGCACTGAAGACGGATACCCTACCATCTTTAATGTTCCG 346 Query 132045 GTCCTCCTTCCGTCAGGGGCAGGAGGAAAGGCTCGCCTGACCATGCCGATTAAGCCCGGC 132104 || | || ||||||| ||||||||||||||||| ||||||||||| ||| || Sbjct 345 GTACAACTACCGTCAGCTAATGGAGGAAAGGCTCGCCTAACCATGCCGATCAAGGTTGGT 286 Query 132105 GACGTGGTAGGCCTCTCCTTCTCTGAACGGAACGAGGGGGACAATAACGATCAGAACACC 132164 || |||| ||| | |||||| || | ||||| | || | ||| || | ||| Sbjct 285 GATATGGTTGGCATTAACTTCTCAGAGAGAAACGAAGATAACTCTTCCGACCAAAGCACT 226 Query 132165 CACCAGCTATTTGCCGGGTGGGCTGTCACTCAGATCTTCACCGATGGTAACTCAAAGGCT 132224 || | || || || | ||||||||| |||||| ||| | ||| | || || Sbjct 225 CATGGATTGTTCGCAGGTTTCGCTGTCACTGAGATCTACACACCAGAAAACGCTAAACCT 166 Query 132225 ATTCATCCAGACAACGTTGTCTTGGAGAACGACAA 132259 || | || || || || ||| | |||||||| || Sbjct 165 ATCGACCCTGATAAGGTAGTCCTTGAGAACGATAA 131 >seq1991 Length=333 Score = 98.7 bits (108), Expect = 9e-16 Identities = 124/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 79622 ACCTTCCGCCGCGTTAGGGTGGAACAATGTAATGTTCTTACCCTGCTGGAGGCGAGAGTA 79681 |||| ||||| |||| || ||||||| | || || || ||| || || || Sbjct 167 ACCTCCCGCCACGTTCGGATGGAACAGGGAGATTTTACCTCCAGTCTGAAGACGCTTATA 108 Query 79682 CAGCATTTTGTTCAACTGGAGTCCGTAGTCCACGTGGCGAGCACGGGTGCTCT-CAGTAC 79740 || || |||||||| || | |||||||| || |||||| |||| || |||| | || | Sbjct 107 CATCAACTTGTTCAATTGCAAGCCGTAGTCAACATGGCGAACACGTGT-CTCTTCTGTTC 49 Query 79741 CTCGGTTGTTCTTCAGCACAATCAGACTTTCGAAATCCCAGTGCCACA 79788 ||||||| ||||| || |||||||| ||| |||||||||||||||| Sbjct 48 CTCGGTTATTCTTAAGGACAATCAGCTCTTCAAAATCCCAGTGCCACA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454946002700320