Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq6487 89.7 6e-13 >seq6487 Length=3923646 Score = 89.7 bits (98), Expect = 6e-13 Identities = 229/346 (66%), Gaps = 2/346 (1%) Strand=Plus/Minus Query 75875 GTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAG 75934 || |||| || ||||||| ||| || ||||| || ||||| |||||||||||||| Sbjct 1175830 GTGTGGATCGCCATTCTCAGATCCCAAGTAGAGACCGGGACACCTTATATGCTTTACAAA 1175771 Query 75935 GATGCTTGTAA-CAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCT 75993 ||| ||| || | | || | || || || || | || || ||||| || || | Sbjct 1175770 GATCATTGCAATCGAAAATCG-AATCATCAGCATATCGGCACTATCAAATGCAGCAACTT 1175712 Query 75994 TTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053 || || || || | |||||| | | | | ||| || |||||||| || || || Sbjct 1175711 GTGTACCGAGATCGTTGAGTACTCCGGTCCTGGGGAGGTCGCCGTTTGCAACTTAGCGTC 1175652 Query 76054 AATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCA 76113 ||||| | | || ||||||| || || ||||| |||| ||| || ||| | Sbjct 1175651 TATCGCTGTCAACATGTTTGTCAATACGGACACGAAAACTTTCGATTTTGACAAGCTTAA 1175592 Query 76114 TGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCC 76173 ||||||| || || || ||||| || |||||| ||| ||||||||||| Sbjct 1175591 AACTGTCACAAAAATCGTCACTCGTAATCTGGACAAAGTCATCGACGTTAATTTTTATCC 1175532 Query 76174 CGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGT 76219 | ||| || || |||||| | |||||||||||||||| Sbjct 1175531 TATCGAGGAGACGAAAACATCTAATCGGAAACACAGACCTATTGGT 1175486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595989525549440