Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq6559 123 5e-23 seq61987 122 2e-22 seq6476 118 2e-21 seq24285 93.3 8e-14 seq7367 86.0 1e-11 seq61286 84.2 4e-11 >seq6559 Length=1815223 Score = 123 bits (136), Expect = 5e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | ||| | || ||||| ||||||| || || ||||| || ||| Sbjct 1624885 ATACCACCACGTAAACGGAGCACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAGTCA 1624826 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| || |||| || | ||||| || |||||||| ||||||||||| || ||| Sbjct 1624825 GAAAGTGTGCGACCATCCTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGGTCCGGT 1624766 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| || || ||||| ||| ||||| || | || || | ||| Sbjct 1624765 GGAATGCCTTCTTTGTCCTGAATTTTTGCTTTGACATTCTCGATTGTGTCCGAAGCTTCA 1624706 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || | ||| ||||| || || || | ||||||| || ||||||||| Sbjct 1624705 ACCTCCAAAGTGATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCATT 1624655 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| | || |||||||| || || | ||||| || ||||||||| Sbjct 1625113 ATACCACCGCGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCA 1625054 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | |||||| || |||||||| || || || ||||| || Sbjct 1625053 GAGAGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGG 1624994 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || ||||| ||||| ||| ||||| || | ||||||| || Sbjct 1624993 GGGATTCCTTCCTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCA 1624934 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || ||||| || || || || || || | || || ||||| Sbjct 1624933 ACTTCCAACGTGATGGTCTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 1624884 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || || ||||| | ||| || | || || | ||||||||||| ||||| |||||| Sbjct 1625749 ATGTTGTAGTCAGACAGTGTGCGGCCGTCCTCGAGCTGTTTACCAGCGAAGATCAATCTC 1625690 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| || || || |||||||| || || ||||| || ||||| || | Sbjct 1625689 TGCTGATCTGGGGGGATACCTTCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTG 1625630 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || |||| || ||||| | || ||||| || || || || ||||| | || |||||| Sbjct 1625629 TCAGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGC 1625570 Query 192535 AT 192536 || Sbjct 1625569 AT 1625568 Score = 93.3 bits (102), Expect = 8e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | || || | || ||||| | ||| | || || |||||| || || Sbjct 1624657 ATTCCACCACGCAGTCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCT 1624598 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || | || || | || || ||||| ||||| || | ||| |||||||| Sbjct 1624597 GACAAGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGC 1624538 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || || || ||| ||||| || | || || | ||| Sbjct 1624537 GGGATGCCTTCTTTATCCTGAATCTTCGCTTTGACATTCTCAATCGTGTCCGAAGCTTCG 1624478 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || | ||| || || || || || || ||||||| || ||||||||| Sbjct 1624477 ACCTCCAAAGTGATAGTCTTTCCTGTCAAAGTTTTAACGAAGATCTGCATT 1624427 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | || || | || ||||| | ||| | || || |||||| || || Sbjct 1624429 ATTCCACCGCGCAGGCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCG 1624370 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || | || || | || || ||||| ||||| || | ||| |||||||| Sbjct 1624369 GACAGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGC 1624310 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || || || || || || || || || | || || | || Sbjct 1624309 GGGATTCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCGATGGTGTCGGAAGCCTCA 1624250 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||| ||||| || |||||||| || || | ||||||||||| Sbjct 1624249 ACTTCAAGAGTTATGGTCTTCCCAGTTAACGTCTTCACGAATATCTGCAT 1624200 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || || ||||| | ||| || | || || | |||||||| || ||||| |||||| Sbjct 1625521 ATGTTGTAGTCAGACAGTGTGCGGCCGTCCTCGAGCTGTTTACCGGCGAAGATCAATCTC 1625462 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || ||||| || || || ||||| || || || ||||| ||| ||||| || | Sbjct 1625461 TGCTGATCTGGGGGGATACCTTCCTTGTCCTGAATTTTGGCTTTGACATTTTCGATTGTG 1625402 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || | || || || || || ||||||||||| || | || || | || |||||| Sbjct 1625401 TCCGAAGCCTCAACCTCCAGTGTGATGGTTTTACCCGTGAGCGTCTTGACGAAAATCTGC 1625342 Query 192535 AT 192536 || Sbjct 1625341 AT 1625340 >seq61987 Length=372 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||| | || |||||||| || || | ||||| || ||||||||| Sbjct 59 ATACCACCGCGAAGTCTCAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCA 118 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | |||||| || |||||||| || || || ||||| || Sbjct 119 GAGAGCGTGCGACCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGG 178 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| ||||| || ||||| ||| ||||| || | || |||| || Sbjct 179 GGGATTCCTTCCTTATCCTGAATTTTGGCTTTGACATTCTCGATCGTGTCAGACGCCTCA 238 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || ||||| || || || || ||||| | || |||||||| Sbjct 239 ACTTCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCAT 288 >seq6476 Length=10381176 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | |||||||| || | ||| | |||| || || ||| || |||||| Sbjct 5656907 ATACCTCCGCGAAGACGTAGAACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCA 5656848 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | |||| |||| || | ||| || ||||||||||| || | |||||||| || Sbjct 5656847 GAAAGAGTTCTGCCATCCTCTAGTTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGA 5656788 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| || || || ||| ||| ||||| ||||| || || | ||| Sbjct 5656787 GGAATACCTTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATAGTGTCAGAAGCTTCC 5656728 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || |||||||| ||||| | ||||| | || || ||||| Sbjct 5656727 ACCTCGAGGGTGATGGTTTTTCCAGTAAGAGTTTTCACGAAGATTTGCAT 5656678 Score = 104 bits (114), Expect = 5e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 || || | ||| ||||| ||||| || | |||| ||||| ||| || ||||| || Sbjct 5657360 CCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCGGAA 5657301 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | |||| | || |||| || || ||||| || || || | ||||||||| ||||| Sbjct 5657300 AGGGTTCTGCCGTCTTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGTGGA 5657241 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 ||||||||||| || || ||||| || || || ||| | || || | ||| ||| Sbjct 5657240 ATTCCTTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATTGTGTCAGAGGCTTCAACT 5657181 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || |||||||| || || | ||||| | || || ||||| Sbjct 5657180 TCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 5657134 >seq24285 Length=372 Score = 93.3 bits (102), Expect = 8e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | || || | || ||||| | ||| | || || |||||| || || Sbjct 316 ATTCCACCACGCAGTCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCG 257 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | || || ||||| ||||| || | ||| |||||||| Sbjct 256 GACAGGGTACGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGC 197 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || || || ||| ||||| || | || || | ||| Sbjct 196 GGGATGCCTTCTTTATCCTGAATCTTCGCTTTGACATTCTCAATCGTGTCCGAAGCTTCA 137 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || | ||| ||||| || || || | ||||||| || ||||||||| Sbjct 136 ACCTCCAAAGTGATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCATT 86 >seq7367 Length=54923 Score = 86.0 bits (94), Expect = 1e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||| |||| | || || || || |||||||| | ||||| ||| |||||||| || Sbjct 20309 ACCGCCTCGCAAGCGCAACACCAAGTGTAAAGTGGATTCTTTCTGGATGTTATAATCCGA 20368 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | || | |||| |||||||| || |||||||| || ||||| ||||||||||| || Sbjct 20369 CAGAGTCCTGCCATCTTCCAATTGCTTGCCAGCAAAAATCAATCTTTGTTGATCAGGCGG 20428 Query 192429 TATTCCT 192435 |||||| Sbjct 20429 AATTCCT 20435 >seq61286 Length=444 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 192391 TGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATT 192450 |||||||| || ||||| |||||||| ||||| || || || |||||||| || || ||| Sbjct 19 TGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGAATT 78 Query 192451 TTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 192510 || ||| ||||| || | || || | || || || || || ||||||||||| Sbjct 79 TTGGCTTTGACATTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATGGTTTTACCC 138 Query 192511 GTTAATGTTTTAATAAATATCTGCAT 192536 || | || || | || |||||||| Sbjct 139 GTGAGCGTCTTGACGAAAATCTGCAT 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983498809393800