Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6679 109 2e-18 seq8365 84.2 6e-11 >seq6679 Length=3560385 Score = 109 bits (120), Expect = 2e-18 Identities = 172/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 302574 TTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGT 302633 ||||||| ||| || ||||||||||| || ||||| || | || || || || || Sbjct 1425545 TTCCATAGCCTTTATCAAACGACGCTGTATGTAACCGGTCTCGGCCGTCTTCACGGCGGT 1425604 Query 302634 ATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCC 302692 ||| || ||||| ||||||| ||||| || |||||| | | ||| || ||| || | Sbjct 1425605 ATCGATGAGACCTTCACGACCGCCCATCGCGTGGAAGTAGAACTC-CGAGGGCGTGAGAC 1425663 Query 302693 CCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAA 302752 | ||| | | || |||| ||||| || || | |||||| | ||| |||| ||| Sbjct 1425664 CGGCAAGATACGAATTCTCGACGAAGCCGCGAGACTCGGGTCCGTAGTCATCCTTGATAA 1425723 Query 302753 AGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCT 302812 | || |||||||| || || | ||| | || || ||||| || ||||||||||||| Sbjct 1425724 AATGCGGCAGGGTTCTCTTGCGGAAACCGAAAGGTATCCGCTTACCCTCAACGTTCTGCT 1425783 Query 302813 GTCC 302816 | || Sbjct 1425784 GGCC 1425787 >seq8365 Length=25698 Score = 84.2 bits (92), Expect = 6e-11 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 251830 TCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCG 251889 ||| ||| || |||||||||||||| ||| ||||| || |||||||| || |||||| Sbjct 6854 TCTATCAAGTGACCGATAGTCATACGAGAGGGGATAGCGTGAGGATTGATAATAATGTCG 6913 Query 251890 GGTTTCAGTCCATCAGCA-GTGAAGGGCATATCCTTTTCCTCAATAATGTTTCCAATA-G 251947 || | || || || ||| | ||| ||||| |||| | | | || || ||| | | Sbjct 6914 GGGGTAAGACCCTC-GCATGAGAACGGCATGTCCTCCTGC-CTGTACTGAATCCCGCATG 6971 Query 251948 TTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTAC 252007 | |||||||| |||||||| || || || || || || ||| ||| || || | Sbjct 6972 TACCCTTTTGCCCGTGACGCGACGCAAATTTGTCGCCGATCTGCGGAATGCGTACGCTGC 7031 Query 252008 GAAGGCGAACCTTACAGAAGTTGTAACCATCACCGTT 252044 | | ||| | ||| ||||| ||||| || || | ||| Sbjct 7032 GCACGCGGATCTTGCAGAATTTGTATCCCTCGCTGTT 7068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470350700110556