Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq8374 111 2e-18 seq6476 93.3 5e-13 seq6580 87.8 2e-11 >seq8374 Length=807232 Score = 111 bits (122), Expect = 2e-18 Identities = 156/217 (72%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 869181 CTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCT 869240 ||||||| || ||| | |||||||||||||| ||| || ||||||| || || |||| Sbjct 792213 CTTCGTCTCGCGAGATAAGTTCGTTGCTAAAGGTGAGACCTGGCATGACTCCACGTTTCT 792154 Query 869241 TGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGC 869300 | |||||||| || || ||||||||| ||| || || |||||||| || || || Sbjct 792153 TCAGCCAAAAAATCGCTGCGAAACTGCCGCTGAAGAATATACCCTCGACCGCCGCGAACG 792094 Query 869301 CGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGT 869360 |||| | || || | ||| ||| | || ||| | |||||||| || | ||||| | Sbjct 792093 CGATTATACGTTCAGGAAA--TGTAG-CGCTCTCGTGATTGATCCAGTTTAATGCCCAAT 792037 Query 869361 CGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397 |||||| |||| ||| | || | || ||||| || Sbjct 792036 TGGCCTTCTTCCCCACACAAGGAAGTGTCTCGATCGC 792000 >seq6476 Length=10381176 Score = 93.3 bits (102), Expect = 5e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||||||| ||| | || | || || ||||||||||| || | || Sbjct 4644471 GCTTGGCCAATTCGCCGGGCAGAAGAAGCCTTACAGCAGTCTGGATCTCCCGAGACGTGA 4644412 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| ||||| || || || | ||||||| |||| | Sbjct 4644411 TTGTCGAGCGCTTGTTGTAGTGAGCCAGGCGTGATGCTTCAGCCGCGATGCGCTCGAATA 4644352 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||| ||||| ||||||| ||| | |||| ||||||| || ||| || | Sbjct 4644351 CATCGTTAACAAAGCTATTCATGATGCTCATAGCCTTGCTGGAGATTCCGGTGTCAGGAT 4644292 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| | |||||||||||| Sbjct 4644291 GAACCTGCTTCAATACCTTGTAGATG 4644266 >seq6580 Length=946877 Score = 87.8 bits (96), Expect = 2e-11 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||||||| ||| ||| | || | || || || |||||||| || | | ||| || Sbjct 887086 GCCAGTTCTCCGGGCAGCAAAAGCCTGACAGCAGTTTGGATCTCCCGAGAGGTGATGGTT 887145 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||| ||||| |||| |||| |||| ||||||| | |||| || |||| | ||| Sbjct 887146 GAGCGTTTGTTGTAGTGAGCCAAACGGGATGCCTCGGCGGCGATACGCTCGAAGACATCG 887205 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||||||| ||||| | ||| | ||| ||||||| || ||| || || ||| Sbjct 887206 TTGACAAAGCTATTCATTATGCTCATAGCTTTGCTGGAGATTCCGGTGTCCGGATGGACC 887265 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| || || || |||||| Sbjct 887266 TGCTTCAGTACTTTATAGATG 887286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6100755552438796