Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_022052.1 Length=76050 Score E Sequences producing significant alignments: (Bits) Value seq2643 82.4 4e-11 seq1268 82.4 4e-11 >seq2643 Length=320 Score = 82.4 bits (90), Expect = 4e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 63475 GTAGCGCAGCTTGGTAGCGCGCCTGATTTGGATTCAGGGGGTCGGAGGTTCAAATCCT 63532 |||||||||||||||||||| |||||||||| ||||||||||| |||||| |||||| Sbjct 170 GTAGCGCAGCTTGGTAGCGCACCTGATTTGGGATCAGGGGGTCGTAGGTTCGAATCCT 113 >seq1268 Length=413 Score = 82.4 bits (90), Expect = 4e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 64715 ACGCGTCGTTAGCTCAGTTGGTAGAGCAGCCGACTCTTAATCGGCGGGTCGGGGGTTCAA 64774 ||| || |||||||||||||||||||||| ||||||||||| |||||||| |||||| | Sbjct 184 ACGGGTGATTAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGTCGTGGGTTCGA 125 Query 64775 GTCCCTCA 64782 |||||| Sbjct 124 ACCCCTCA 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243004602996948