Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6580 120 5e-21 seq6476 102 1e-15 seq8374 96.9 5e-14 >seq6580 Length=946877 Score = 120 bits (132), Expect = 5e-21 Identities = 171/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || ||||||||| | |||||||| ||| ||| Sbjct 887042 TGTACTTGGTGACGGCCTTGGTGCCTTCACTCACGGCGTGCTTTGCCAGTTCTCCGGGCA 887101 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | || || || |||||||| || | | ||| || ||| ||||| | Sbjct 887102 GCAAAAGCCTGACAGCAGTTTGGATCTCCCGAGAGGTGATGGTTGAGCGTTTGTTGTAGT 887161 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| ||||||| | |||| || |||| | ||||||||||| |||| Sbjct 887162 GAGCCAAACGGGATGCCTCGGCGGCGATACGCTCGAAGACATCGTTGACAAAGCTATTCA 887221 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||| | |||| ||||||| || ||| || || |||||||| || || || | Sbjct 887222 TTATGCTCATAGCTTTGCTGGAGATTCCGGTGTCCGGATGGACCTGCTTCAGTACTTTAT 887281 Query 1485710 A 1485710 | Sbjct 887282 A 887282 >seq6476 Length=10381176 Score = 102 bits (112), Expect = 1e-15 Identities = 167/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| ||||| || ||||| || || || || |||||| |||||| ||||||| ||| Sbjct 4644510 TGTATTTGGTAACCGCCTTTGTTCCTTCGCTAACAGCGTGCTTGGCCAATTCGCCGGGCA 4644451 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | || || ||||||||||| || | ||| || ||||||||| | Sbjct 4644450 GAAGAAGCCTTACAGCAGTCTGGATCTCCCGAGACGTGATTGTCGAGCGCTTGTTGTAGT 4644391 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||||||| || || | ||||||| |||| | ||||| ||||| |||| Sbjct 4644390 GAGCCAGGCGTGATGCTTCAGCCGCGATGCGCTCGAATACATCGTTAACAAAGCTATTCA 4644331 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||| || ||| || || |||||||| | ||||||| Sbjct 4644330 TGATGCTCATAGCCTTGCTGGAGATTCCGGTGTCAGGATGAACCTGCTTCAATACCTTGT 4644271 Query 1485710 A 1485710 | Sbjct 4644270 A 4644270 >seq8374 Length=807232 Score = 96.9 bits (106), Expect = 5e-14 Identities = 152/217 (70%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 794342 CTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCT 794401 ||||||| || ||| | ||||||||||||| ||| || ||||||| || || |||| Sbjct 792213 CTTCGTCTCGCGAGATAAGTTCGTTGCTAAAGGTGAGACCTGGCATGACTCCACGTTTCT 792154 Query 794402 TGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGC 794461 | |||||||| || || ||||||||| ||| || || |||||||| || || || Sbjct 792153 TCAGCCAAAAAATCGCTGCGAAACTGCCGCTGAAGAATATACCCTCGACCGCCGCGAACG 792094 Query 794462 CGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACT 794521 ||| | || || | ||| || | || ||| | |||||||| || | ||||| | Sbjct 792093 CGATTATACGTTCAGGAAATGTAGC---GCTCTCGTGATTGATCCAGTTTAATGCCCAAT 792037 Query 794522 CTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558 ||||| |||| ||| | || | || ||||| || Sbjct 792036 TGGCCTTCTTCCCCACACAAGGAAGTGTCTCGATCGC 792000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7907971735648932