Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_022343.1 Length=159991 Score E Sequences producing significant alignments: (Bits) Value seq2061 358 7e-94 seq2042 183 3e-41 seq3161 82.4 8e-11 >seq2061 Length=505 Score = 358 bits (396), Expect = 7e-94 Identities = 342/438 (78%), Gaps = 0/438 (0%) Strand=Plus/Minus Query 118829 AACCAGATCAACAGCATCGTCACCTTCTCCACAGAAGGCATCGTGCTGTACGGTGATAAG 118888 |||||||||||||||||||| |||||| |||| |||||||||||| |||||||||| || Sbjct 474 AACCAGATCAACAGCATCGTTACCTTCACCACTGAAGGCATCGTGTTGTACGGTGACAAA 415 Query 118889 ACTGGCCTGACCCGCCCGTCGGCGTTCGATCGCATTAACGTGCGCGGCCTGTTCATCATG 118948 || |||||||||||||| |||||||| ||||| ||||| || || || |||||| Sbjct 414 ACCGGCCTGACCCGCCCAAGTGCGTTCGACCGCATCAACGTCCGTGGTACTTTTATCATG 355 Query 118949 GCTGAACAAAACATCGCTGCCATCGCCAAATACTATCTTGGTGAAAACAACGATGCGTTC 119008 ||||| |||||| ||||||| || |||||||| || || || || ||||||||||| Sbjct 354 GCTGAGACCAACATCTCTGCCATTGCTAAATACTACCTGGGCGAGAATAACGATGCGTTT 295 Query 119009 ACTCGCAGCCTGTTTAGCAACGCCGTTCGTCCTTATATCCGCCAGTTGGCCAACATGGGC 119068 || ||| |||| | |||||| || || ||| | |||||| || | |||||| Sbjct 294 ACGCGCCAGTTGTTCACCAACGCGGTCACCCCATATGTTCGCCAGCTGATCGGCATGGGT 235 Query 119069 GCGATTTATGACGGTAAAGTGAAGTGCGACGAAGACAATAACCCGGCTGAAGTTATTGCT 119128 || || || ||||| || || || ||||||||||| ||||||||| ||| | || Sbjct 234 GCAATCGTCGATGGTAAGGTCAAATGTGACGAAGACAACAACCCGGCTTCGGTTGTAGCC 175 Query 119129 GCCAACCAGATGGTTGCCGGTATCTGGCTGAAACCAGAATACAGCATCAACTGGGTCTAC 119188 |||||||| ||| | || |||||||||||||||||||||||||||||||||||| ||||| Sbjct 174 GCCAACCAAATGATCGCAGGTATCTGGCTGAAACCAGAATACAGCATCAACTGGATCTAC 115 Query 119189 TTGGATTTTGCTGCCGTTCGTCCGGACATGGAGTTCTCGGAAATCGAATCCGGCGGCGGT 119248 | ||||| || ||||| ||||||||||| | |||||| ||| | ||| ||| || Sbjct 114 CTCGATTTCGCAGCCGTCCGTCCGGACATTGCGTTCTCCGAAGTGGAAGGTGGCATGGGC 55 Query 119249 ATTGTCGCAGCGTCATAA 119266 || || || ||||||||| Sbjct 54 ATCGTGGCCGCGTCATAA 37 >seq2042 Length=482 Score = 183 bits (202), Expect = 3e-41 Identities = 316/456 (69%), Gaps = 5/456 (1%) Strand=Plus/Minus Query 121291 GAAAAACGTGCATTCTATCTGGACGTCGGTACTCTCGGTAAGAAATCTGCCGAAGAATAC 121350 || || || |||||||| || |||||||||| | ||||||||||| || ||||| || Sbjct 482 GAGAAGCGCGCATTCTACCTTGACGTCGGTATGTTGGGTAAGAAATCCGCTGAAGAGTAT 423 Query 121351 ATGACTATGATGATGGGTAAATTCAAAAACCGTCTGGCATTCGACCG-CAGTACTGGTAA 121409 ||| | ||||||||||| || || || ||| ||| ||| |||| ||| || || || Sbjct 422 ATGGCCATGATGATGGGCAAGTTTAAGAACAACCTGTCATATAACCGTCAG-ACCGGCAA 364 Query 121410 GATTACGGGCAACAGCCATCTGATGGGGATTGCTGAGGACTACTGGTTGCCTCGTCGTGA 121469 | | ||| ||| || || ||||| || ||||||||||||||| |||| |||||||| Sbjct 363 GGTACAAGGCGACACTCACCTCATGGGTATCGCTGAGGACTACTGGATGCCACGTCGTGA 304 Query 121470 AGGTCAGAACGCTACTGAGATTTCAACAGTCGGTGGTGGCGACCAATTAGGACAGATGGA 121529 || |||||||| || || || || ||||||| || ||||| | || || ||||| Sbjct 303 GGGACAGAACGCGACCGAAATAAGCACCATCGGTGGCGGTGACCAGCTGGGCCAAATGGA 244 Query 121530 CCACGTCAATTACTTCCTTGAAAAACTGTATAGCTCTCTGTTTATTCCAAAGAGTCGTAT 121589 || || |||||||||| || ||||| | |||| ||||| ||||| || | Sbjct 243 TCATGTGAATTACTTCCGCAGCAAGCTGTACGGTGCTCTCAAGATTCCTAAGAGCCGATT 184 Query 121590 CCAGGA---AGAAGGGAGCATCAATATTGGCGGTTCTAATTTGGCTGAGATCACCCAGGA 121646 | || | || | ||||||||| ||||| | || | | ||| | || | || Sbjct 183 GGATGACGGTGGCGGCAACATCAATATCGGCGGGAGTGATCTCGGTGAAGTAACTCGTGA 124 Query 121647 AGAACTGCGGTTCAATAAATTCTGCGCAGGTTTGCGCCGTCGTTATTCTAAATTCTTCTC 121706 || || ||||| || ||||| || || ||||||| || || || |||||| Sbjct 123 TGAGAATCGCTTCAAGAAGTTCTGTGCTCGTCTGCGCCGCCGGTACTCACTCATCTTCTT 64 Query 121707 TGAATTTTTACGTCGTCAGTTAATTTTGAAAAAGAT 121742 | | | ||||| ||||| || |||||||||| Sbjct 63 GGGCCTGCTTCGTCGACAGTTGATCATGAAAAAGAT 28 >seq3161 Length=466 Score = 82.4 bits (90), Expect = 8e-11 Identities = 109/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 137064 CTGTATCAGACTTGCCATATCCTCCACAAATCTGGCAAGTATTTTATCGTCCATTTCAAG 137123 ||||||||||| ||||||||| ||| || ||||||| ||||| || |||||| Sbjct 267 CTGTATCAGACCTGCCATATCACCCAGCGCGGCGGGAAGTATTACATCGTTCACTTCAAG 326 Query 137124 CATCTGTTTATGCTGGATGGGCATTACAACGGCTTTCAGCGTGAAGATGTCCTGCGTATG 137183 || | | |||| | || |||| | ||||| || || |||||| ||||||| ||| Sbjct 327 CACTTCTATATGTTTGAGGGGCGTCGTAACGGATTGTGCCGGGAAGATATCCTGCGCATG 386 Query 137184 AATCG-CATCATTCGTCTTCTGGAGCAGTG 137212 || || ||| || || || || |||||||| Sbjct 387 AACCGTCATTATCCGCCTGCTAGAGCAGTG 416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511345509264480