Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_022768.1 Length=154701 Score E Sequences producing significant alignments: (Bits) Value seq2061 325 4e-84 seq2042 170 2e-37 >seq2061 Length=505 Score = 325 bits (360), Expect = 4e-84 Identities = 337/439 (77%), Gaps = 2/439 (0%) Strand=Plus/Minus Query 50654 AACCAGATTAACAGCATCGTGACCTTCTCCAATGAAGGTATCGTGTTGTATGGTGACAAA 50713 |||||||| ||||||||||| |||||| ||| |||||| ||||||||||| ||||||||| Sbjct 474 AACCAGATCAACAGCATCGTTACCTTCACCACTGAAGGCATCGTGTTGTACGGTGACAAA 415 Query 50714 ACTGGTCTGACTCGTCCGTCTGCTTTCGATCGTATCAATGTTCGCGGTCTGTTTATTATG 50773 || || ||||| || || ||| ||||| || ||||| || || ||| ||||| ||| Sbjct 414 ACCGGCCTGACCCGCCCAAGTGCGTTCGACCGCATCAACGTCCGTGGTACTTTTATCATG 355 Query 50774 GCAGAACAGAACATCGCTGCAATCGCCAAATATTACCTTGGTGAGAACAATGATGCGTTC 50833 || || |||||| |||| || || ||||| ||||| || ||||| || |||||||| Sbjct 354 GCTGAGACCAACATCTCTGCCATTGCTAAATACTACCTGGGCGAGAATAACGATGCGTTT 295 Query 50834 ACTCGC-AGTCTGTTCAGCAACGCTGTTCGTCCTTATATTCGCCAGCTGGCAAATATGGG 50892 || ||| ||| |||||| |||||| || || ||| ||||||||||| ||||| Sbjct 294 ACGCGCCAGT-TGTTCACCAACGCGGTCACCCCATATGTTCGCCAGCTGATCGGCATGGG 236 Query 50893 TGCGATCTACGATGGTAAAGTCAAGTGTGACGAAGATAACAACACTGCTGACGTCATCGC 50952 ||| ||| ||||||||| ||||| ||||||||||| |||||| | ||| || | || Sbjct 235 TGCAATCGTCGATGGTAAGGTCAAATGTGACGAAGACAACAACCCGGCTTCGGTTGTAGC 176 Query 50953 GGCAAATCAGATGGTCGCTGGTATCTGGCTGAAACCGGAATACAGCATCAATTGGGTGTA 51012 || || || ||| |||| ||||||||||||||||| |||||||||||||| ||| | || Sbjct 175 CGCCAACCAAATGATCGCAGGTATCTGGCTGAAACCAGAATACAGCATCAACTGGATCTA 116 Query 51013 TCTTGACTTTGCTGCAGTTCGTCCGGATATGGAGTTCTCTGAAATTGAATCCGGCGGCGG 51072 || || || || || || |||||||| || | |||||| ||| | ||| ||| || Sbjct 115 CCTCGATTTCGCAGCCGTCCGTCCGGACATTGCGTTCTCCGAAGTGGAAGGTGGCATGGG 56 Query 51073 CATCGTTGCTGCTTCTTAA 51091 |||||| || || || ||| Sbjct 55 CATCGTGGCCGCGTCATAA 37 >seq2042 Length=482 Score = 170 bits (188), Expect = 2e-37 Identities = 218/299 (73%), Gaps = 6/299 (2%) Strand=Plus/Minus Query 53105 GAAAAACGCGCATTCTATCTTGACGTCGGTACTCTTGGTAAGAAATCTGCTGAAGAATAC 53164 || || ||||||||||| ||||||||||||| | ||||||||||| |||||||| || Sbjct 482 GAGAAGCGCGCATTCTACCTTGACGTCGGTATGTTGGGTAAGAAATCCGCTGAAGAGTAT 423 Query 53165 ATGACCATGATGATGGGCAAATTCAAAAACCGTAAC---GCATATGACCGCACCACTGGT 53221 ||| |||||||||||||||| || || ||| ||| ||||| |||| || || Sbjct 422 ATGGCCATGATGATGGGCAAGTTTAAGAAC---AACCTGTCATATAACCGTCAGACCGGC 366 Query 53222 AAAATCACAGGCAACGCCCATCTTATGGGTATTGCAGAAGATTATTGGTTGCCGCGCCGC 53281 || | |||| || | || || |||||||| || || || || ||| |||| || || Sbjct 365 AAGGTACAAGGCGACACTCACCTCATGGGTATCGCTGAGGACTACTGGATGCCACGTCGT 306 Query 53282 GAAGGTCAGAATGCTACAGAGATCGCGACTGTTGGTGGTGGGAATCAATTGGGCGAAATG 53341 || || ||||| || || || || || | ||||| || | || ||||| ||||| Sbjct 305 GAGGGACAGAACGCGACCGAAATAAGCACCATCGGTGGCGGTGACCAGCTGGGCCAAATG 246 Query 53342 GATCACGTGAACTATTTCCGTGAAAAACTCTATGATGCTCTAATGATCCCTAAGAGCCG 53400 ||||| ||||| || ||||| || || || | |||||| | ||| ||||||||||| Sbjct 245 GATCATGTGAATTACTTCCGCAGCAAGCTGTACGGTGCTCTCAAGATTCCTAAGAGCCG 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494433969205280