Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17]
77,788 sequences; 324,120,201 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq34431 96.9 5e-15
seq6559 96.9 5e-15
seq34430 87.8 3e-12
seq6476 84.2 3e-11
>seq34431
Length=440
Score = 96.9 bits (106), Expect = 5e-15
Identities = 157/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| | || || ||||| || ||| | || || ||| |
Sbjct 204 TGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACTCTCGAAGTTGAAGCCTCTG 263
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | || |||||| || || ||| |||||||||||||| || |||||||
Sbjct 264 ACACAATTGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCAAC 323
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | | ||||| || || || ||| | || ||| |||||| | | || ||||| |
Sbjct 324 AGCGTTTGATTTTCGCTGGCAAGCAACTCGAAGATGGTAGAACTCTTTCCGACTATAACA 383
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| |||||||| || || ||||||| || | || | |||||||
Sbjct 384 TCCAAAAAGAGTCTACGCTCCATTTGGTTCTGCGTCTTCGAGGAGG 429
>seq6559
Length=1815223
Score = 96.9 bits (106), Expect = 5e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | ||||| | |||||||| || || ||| | || || ||| | |
Sbjct 1624657 TGCAGATCTTCGTTAAAACCCTGACAGGAAAGACCATCACTTTGGAGGTTGAAGCTTCGG 1624716
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || | ||||| ||| ||||| || ||||||||||||||||| || ||||
Sbjct 1624717 ACACAATCGAGAATGTCAAAGCAAAAATTCAGGACAAAGAAGGCATTCCACCGGACCAAC 1624776
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||| | || ||||| || ||||| | || ||| | | || | | || || ||||
Sbjct 1624777 AGAGATTGATCTTTGCCGGAAAACAGCTCGAGGATGGTCGCACACTTTCTGACTACAATA 1624836
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || || ||||| ||| | ||||| || | || ||| | || ||||
Sbjct 1624837 TTCAGAAGGAATCTACTTTGCATTTGGTGCTCCGTTTACGTGGTGGTA 1624884
>seq34430
Length=319
Score = 87.8 bits (96), Expect = 3e-12
Identities = 155/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| | || || ||||| || || | || || ||| |
Sbjct 83 TGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCTG 142
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | || |||||| || || ||| |||||||||||||| || ||||| |
Sbjct 143 ACACAATTGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCAGC 202
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | | |||||||| || || ||| | || ||| || || | |||||||||| |
Sbjct 203 AGCGTTTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAACA 262
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || ||||| || || ||||||| || | || | |||||||
Sbjct 263 TCCAGAAAGAGTCTACGCTCCATTTGGTTCTGCGTCTTCGAGGAGG 308
>seq6476
Length=10381176
Score = 84.2 bits (92), Expect = 3e-11
Identities = 154/226 (68%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | ||||| | || || ||||| || || | || || ||| |
Sbjct 5656907 TGCAAATCTTTGTGAAAACTCTCACTGGCAAAACCATCACCCTCGAAGTTGAAGCCTCTG 5656966
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || | || |||||| || || ||| |||||||||||||| || ||||| |
Sbjct 5656967 ACACAATCGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCAGC 5657026
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | || |||||||| || || ||| | || ||| || || | |||||||||| |
Sbjct 5657027 AGCGTCTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAACA 5657086
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || ||||| || || ||||||| || | || | |||||||
Sbjct 5657087 TCCAGAAAGAGTCTACGCTCCATTTGGTTCTGCGTCTTCGAGGAGG 5657132
Score = 84.2 bits (92), Expect = 3e-11
Identities = 154/226 (68%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| | || || ||||| || || | || || ||| |
Sbjct 5657135 TGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCTG 5657194
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || |||| || || ||||| || |||||||| |||||||| |||||||
Sbjct 5657195 ACACAATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAAGGAATTCCACCGGATCAAC 5657254
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | | ||||| || || || || | || || ||||| | | ||||| || |
Sbjct 5657255 AGCGTTTGATTTTCGCTGGCAAGCAGCTGGAAGACGGCAGAACCCTTTCCGATTACAACA 5657314
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||||||||| || |||| ||||| |||||| | | |||||
Sbjct 5657315 TCCAAAAAGAATCTACACTCCACTTAGTTTTACGACTTCGCGGAGG 5657360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 785401971100960
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |