Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq6559 156 3e-33 seq34431 150 1e-31 seq6476 149 5e-31 seq61987 141 7e-29 seq34430 140 2e-28 seq61286 132 4e-26 seq7367 95.1 9e-15 >seq6559 Length=1815223 Score = 156 bits (172), Expect = 3e-33 Identities = 168/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| ||||||||||| | || ||||| || ||||| || || || | || |||||| Sbjct 1624873 AAACGGAGCACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGA 1624814 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 ||| ||||| ||||| || ||| | |||||||| || || ||||| ||||| || ||| Sbjct 1624813 CCATCCTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGGTCCGGTGGAATGCCTTCT 1624754 Query 29689 TTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747 ||||| || |||||||| ||||||| | || | ||||| ||| ||| || || | ||| Sbjct 1624753 TTGTCCTG-AATTTTTGCTTTGACATTCTCGATTGTGTCCGAAGCTTCAACCTCCAAAGT 1624695 Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || | ||||||||| || ||||||||| Sbjct 1624694 GATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCATT 1624655 Score = 141 bits (156), Expect = 7e-29 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| | ||||||||||||||||||||| ||||| | || ||||| || ||| Sbjct 1625320 ACCAAATGCAACGTGGATTCTTTTTGAATGTTGTAATCAGAAAGCGTGCGGCCGTCCTCG 1625261 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 || ||||| || || | |||||||| |||||||| || || || || || || || || Sbjct 1625260 AGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTATCCTG- 1625202 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | |||||| | || | |||||||| || || || || || || ||||| Sbjct 1625201 AATTTTGGCTTTGACGTTCTCGATCGTGTCAGATGCCTCAACCTCCAGTGTGATGGTTTT 1625142 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||||||||| || || ||||| Sbjct 1625141 TCCTGTTAAGGTTTTAACGAAAATTTGCAT 1625112 Score = 132 bits (146), Expect = 4e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || ||||| | ||||||||||| |||||||||||||| | | |||||| ||| ||| Sbjct 1625092 ACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAGAGCGTGCGACCATCCTCG 1625033 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 |||||||| || ||| | ||||| ||||||||||| || || || || || |||||||| Sbjct 1625032 AGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGGATTCCTTCCTTGTCTTG- 1624974 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||||||| | || | ||||| || || ||||| | || || || || Sbjct 1624973 AATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGTCTT 1624914 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || ||||| Sbjct 1624913 TCCTGTCAAAGTCTTGACGAAAATTTGCAT 1624884 Score = 131 bits (144), Expect = 1e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||||||||| ||||| |||||||| ||||| | || ||||| || ||||| ||| Sbjct 1625998 TGAAGCGTGGACTCTTTCTGAATGTTGTAATCAGAAAGTGTGCGGCCGTCCTCGAGCTGT 1625939 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || || | || || || |||||||| || |||||||| ||||||||||| |||||| Sbjct 1625938 TTACCGGCGAAGATTAACCTCTGCTGATCTGGAGGAATACCTTCTTTGTCTTG-AATTTT 1625880 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | || || |||| | |||||||| || ||||| | || || || || || || Sbjct 1625879 CGCCTTCACGTTTTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGT 1625820 Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || || |||||||| Sbjct 1625819 CAAGGTTTTGACGAAAATCTGCAT 1625796 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | || || || |||||||| || |||||||| || || || || || || | Sbjct 1624427 TCCACCGCGCAGGCGGAGAACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGA 1624368 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | |||||| || ||||| || || ||||| | ||||| | |||||||| ||||| Sbjct 1624367 CAGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGG 1624308 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||| || ||| |||| || || | || | ||||| ||| || | Sbjct 1624307 GATTCCTTCCTTGTCCTG-AATCTTTGCCTTCACGTTCTCGATGGTGTCGGAAGCCTCAA 1624249 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||||||| || || |||||||| || || || ||||||||||| Sbjct 1624248 CTTCAAGAGTTATGGTCTTCCCAGTTAACGTCTTCACGAATATCTGCAT 1624200 >seq34431 Length=440 Score = 150 bits (166), Expect = 1e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | |||||| |||||||| ||||| || |||||||| |||||||| || | | Sbjct 429 CCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCGGAA 370 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| |||||||| |||||||| | ||||| | || |||||||| ||| Sbjct 369 AGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGGGGA 310 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | || ||| || | || | |||||||| ||| ||| Sbjct 309 ATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAACT 250 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || ||||| || |||||||| || | ||||| || || || |||||| Sbjct 249 TCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCATT 202 Score = 123 bits (136), Expect = 2e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | |||||| |||| ||||| || ||||| ||||||||||||||||| | Sbjct 202 TCCTCCTCGAAGACGCAGAACCAGGTGAAGTGTAGATTCCTTTTGAATGTTATAATCTGA 143 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| |||||||| ||||| ||| | |||| | || |||||||| || Sbjct 142 AAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGGGG 83 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| || ||||||||||| | || ||| || | || | |||||||| ||| || Sbjct 82 AATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGATGCTTCAAC 23 Query 29739 TTCAAGAGTTATAGTTTTGCC 29759 ||| || || || |||||||| Sbjct 22 TTCGAGGGTGATGGTTTTGCC 2 >seq6476 Length=10381176 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | |||||| |||||||| ||||| || ||||| || ||||||||||| | | Sbjct 5657132 CCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAA 5657073 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| |||||||| ||||| ||| | |||| | ||||||||||| ||| Sbjct 5657072 AGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGGGGA 5657013 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | || ||| || | || | |||||||| ||| ||| Sbjct 5657012 ATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGAGGCTTCAACT 5656953 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||||||||| | ||||| ||||| || ||||| Sbjct 5656952 TCGAGGGTGATGGTTTTGCCAGTGAGAGTTTTCACAAAGATTTGCAT 5656906 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || || || || || ||||||||||| ||||| ||||| | || ||| | || || Sbjct 5657342 ACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCGGAAAGGGTTCTGCCGTCTTCC 5657283 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 || || |||||||| | ||||| | || |||||||| ||||| || |||||||| || Sbjct 5657282 AGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGTGGAATTCCTTCTTTGTCCTGG 5657223 Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 | ||| || || |||||| |||||||| ||| ||||| || || || |||||| Sbjct 5657222 ATTTTGGCCTTCACGTTTTCTATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTTTTG 5657163 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | ||||| || || || ||||| Sbjct 5657162 CCGGTGAGAGTTTTCACGAAGATTTGCAT 5657134 >seq61987 Length=372 Score = 141 bits (156), Expect = 7e-29 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || ||||| | ||||||||||| |||||||||||||| | | |||||| ||| ||| Sbjct 80 ACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAGAGCGTGCGACCATCCTCG 139 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 |||||||| || ||| | ||||| ||||||||||| || || || || || || || || Sbjct 140 AGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGGATTCCTTCCTTATCCTG- 198 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||||||| | || | |||||||| || ||||| | || || || || Sbjct 199 AATTTTGGCTTTGACATTCTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGTCTT 258 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || |||||||| || || |||||||| Sbjct 259 TCCTGTCAAGGTTTTGACGAAAATCTGCAT 288 >seq34430 Length=319 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | |||||| |||||||| ||||| || ||||| || ||||||||||| | | Sbjct 308 CCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGAA 249 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| |||||||| ||||| ||| | ||||| | |||||||| || ||| Sbjct 248 AGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGGGGA 189 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | || ||| || | || | |||||||| ||| ||| Sbjct 188 ATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAACT 129 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || |||||||| || | ||||| || || || ||||| Sbjct 128 TCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 82 >seq61286 Length=444 Score = 132 bits (146), Expect = 4e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| | |||||||||||| |||||||| ||||| | || ||||| || ||| Sbjct 184 ACCAAATGCAACGTGGATTCTTTCTGAATGTTGTAATCAGAAAGCGTGCGGCCGTCCTCG 243 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 || ||||| || ||| | |||||||| |||||||| || || || || || || || || Sbjct 244 AGCTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTATCCTG- 302 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | |||||| | || | |||||||| || ||||| | || || || || Sbjct 303 AATTTTGGCTTTGACGTTCTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGTCTT 362 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || |||||||| || || |||||||| Sbjct 363 TCCTGTCAAGGTTTTGACGAAAATCTGCAT 392 >seq7367 Length=54923 Score = 95.1 bits (104), Expect = 9e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | ||| |||| |||||| || | ||||||||||| || ||||||||||||| Sbjct 20310 CCGCCTCGCAAGCGCAACACCAAGTGTAAAGTGGATTCTTTCTGGATGTTATAATCCGAC 20369 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | ||| ||||||||| | ||||||||||| ||||| |||||| Sbjct 20370 AGAGTCCTGCCATCTTCCAATTGCTTGCCAGCAAAAATCAATCTTTGTTGATCAGGCGGA 20429 Query 29680 ATACC 29684 || || Sbjct 20430 ATTCC 20434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384853996308108