Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_023555.1 Length=43017 Score E Sequences producing significant alignments: (Bits) Value seq42077 105 2e-18 >seq42077 Length=1008 Score = 105 bits (116), Expect = 2e-18 Identities = 262/389 (67%), Gaps = 19/389 (5%) Strand=Plus/Plus Query 17219 CCGCTCAAACCAGAAAACAACCGGCATATCAATAACCTTAATAAGCCCGAATCGCTCCGC 17278 |||||||||||| ||||| || || ||| | || | || ||| ||||| ||||| || Sbjct 205 CCGCTCAAACCAAAAAACGACTGGGGCATCCTTCACTTCAACAAGGCCGAAGCGCTCAGC 264 Query 17279 CGTGCGGAAATTTACGCTGCGTGACCGTGCGCGTTTTACCTGTTCTGCGATCTGTTCTCG 17338 ||||||||||| |||||| ||| ||||| | |||| |||| |||| || || Sbjct 265 AGTGCGGAAATTGACGCTGTACTTCCGCGCGCGCTCCGCCTGGGCTGCTATCTCCTCGCG 324 Query 17339 AAACATCTCTACACTAAAAGTTGCCTTAAATAGATTGCATGGAGCACAGGATGGGAACAG 17398 ||||| |||| || || || | || || || |||||||| ||||| | ||| || Sbjct 325 GAACATTTCTAGGCTGAAGGTAGTTTTGAACAGGTTGCATGGCGCACACGCCGGGTTGAG 384 Query 17399 GTTTTCGA-GC-GTATC-ATTTTCAGGTCGCCAAAATTCCCCCGTAG-AAGCAGTTTGTA 17454 ||| || | || || | ||||| || |||| | | || || | ||||||| | Sbjct 385 GTTCTCTATGCAGTCGCGGTTTTC--GT-GCCAGACCTTGCCGGTGGCTTTCAGTTTG-A 440 Query 17455 GCACTCCACTTGTTTT-------ATTTTTAACGAACTCCCACTTACGCAATGCCGGTTCT 17507 | || | | ||| || | | ||| | | ||||| ||||||| Sbjct 441 ATAAGCCTTTGGCTTTCGCCGCCATGT----CCTGCTCGGATTCACGCATCACCGGTTCG 496 Query 17508 ACATGATCGGCGTGCCACCCCCTATCTGAAAGTTCGCACCCGCAATAAGCACAGCGGCCA 17567 || || ||||||||||| || | |||| |||| ||| ||||| ||||| || ||||| Sbjct 497 ACGTGGTCGGCGTGCCAGCCTTTTTCTGGCAGTTTGCAACCGCAGTAAGCGCACCGGCCG 556 Query 17568 CCAAATTTCATGCGAAGTTCTGCGCGTTG 17596 ||||| ||| || | ||||||||| || Sbjct 557 CCAAACTTCTCCCGCAATTCTGCGCGCTG 585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137405756482824