Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq34431 132 5e-26 seq34430 127 2e-24 seq6476 127 2e-24 seq6559 120 3e-22 seq61987 113 4e-20 seq61286 104 2e-17 seq24285 95.1 1e-14 >seq34431 Length=440 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||||||||| | ||||| ||| ||||| | ||||| |||||||| ||||| || ||| Sbjct 430 GCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTTTGGATGTTATAGTCGGA 371 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | || || ||||||||||| || ||||| | |||| ||| || ||||| || || Sbjct 370 AAGAGTTCTACCATCTTCGAGTTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGGGG 311 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||||||||| || || ||||| | || | ||||| | || ||| || Sbjct 310 AATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAAC 251 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||| | ||| | || |||||||| | ||||| ||||| |||||||| Sbjct 250 TTCGAGAGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 203 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 |||||||| | ||||| ||| | |||| ||||||||| ||||| ||||| ||||| Sbjct 201 CCTCCTCGAAGACGCAGAACCAGGTGAAGTGTAGATTCCTTTTGAATGTTATAATCTGAA 142 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || ||||||||||| || || ||| | |||||||| || ||||| || || Sbjct 141 AGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGGGGA 82 Query 137305 ATGCCTTCTTTGTC 137318 |||||||||||||| Sbjct 81 ATGCCTTCTTTGTC 68 >seq34430 Length=319 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||||||||| | ||||| ||| ||||| | ||||| ||||| || ||||| ||||| Sbjct 309 GCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGA 250 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | || || ||||||||||| || || ||| | |||| ||| |||||||| || || Sbjct 249 AAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAAACGCTGCTGATCTGGGGG 190 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||||||||| || || ||||| | || | ||||| | || ||| || Sbjct 189 AATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCAATTGTGTCAGAGGCTTCAAC 130 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||| | || | || |||||||| | ||||| ||||| |||||||| Sbjct 129 TTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 82 >seq6476 Length=10381176 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||| || | || |||||||| || | ||||||||||||||| |||||||||||| Sbjct 5657361 GCCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCGGA 5657302 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | || || |||||| || || || ||||| | |||| ||| || ||||| || || Sbjct 5657301 AAGGGTTCTGCCGTCTTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGTTGATCCGGTGG 5657242 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 || ||||||||||| ||||| || | | ||| | ||||| | || ||| || Sbjct 5657241 AATTCCTTCTTTGTCCTGGATTTTGGCCTTCACGTTTTCTATTGTGTCAGAGGCTTCAAC 5657182 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||| | || | || |||||||| | ||||| ||||| |||||||| Sbjct 5657181 TTCGAGGGTGATGGTTTTGCCGGTGAGAGTTTTCACGAAGATTTGCAT 5657134 Score = 125 bits (138), Expect = 7e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||||||||| | ||||| ||| ||||| | ||||| ||||| || ||||| ||||| Sbjct 5657133 GCCTCCTCGAAGACGCAGAACCAAATGGAGCGTAGACTCTTTCTGGATGTTATAATCTGA 5657074 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | || || ||||||||||| || || ||| | |||||||| |||||||| || || Sbjct 5657073 AAGAGTCCTGCCATCTTCGAGTTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGGGG 5657014 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||||||||| || || ||||| | || | ||||| | || ||| || Sbjct 5657013 AATGCCTTCTTTGTCTTGGATCTTGGCTTTTACGTTCTCGATTGTGTCAGAGGCTTCAAC 5656954 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 ||| | || | || ||||| || | ||||| || || ||||||||| || Sbjct 5656953 TTCGAGGGTGATGGTTTTGCCAGTGAGAGTTTTCACAAAGATTTGCATACCT 5656902 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | ||| | ||| | ||||| |||||||| || || ||||||||||| Sbjct 5656904 CCTCCGCGAAGACGTAGAACCAGATGAAGCGTAGATTCCTTCTGGATGTTGTAATCAGAA 5656845 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || || || ||||| || |||||| |||||| |||||| ||||| ||||| Sbjct 5656844 AGAGTTCTGCCATCCTCTAGTTGCTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGA 5656785 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| || || ||| | | || | ||||| | | ||| || Sbjct 5656784 ATACCTTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATAGTGTCAGAAGCTTCCACC 5656725 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | || || || || | ||||| ||||| |||||||| Sbjct 5656724 TCGAGGGTGATGGTTTTTCCAGTAAGAGTTTTCACGAAGATTTGCAT 5656678 >seq6559 Length=1815223 Score = 120 bits (132), Expect = 3e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 |||||||||||| | ||| |||||||| || ||||| ||||| | |||| || Sbjct 1625096 CAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAGAGCGTGCGACCATC 1625037 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||||||||||| || ||| |||||| | ||||||||| || || || ||||| ||||| Sbjct 1625036 CTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGGATTCCTTCCTTGTC 1624977 Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378 |||||| ||| | | || | |||||||| | || ||||| | || | || Sbjct 1624976 TTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAACGTGATGGT 1624917 Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||| || ||||| || || ||||| ||||||||| Sbjct 1624916 CTTTCCTGTCAAAGTCTTGACGAAAATTTGCATA 1624883 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | | |||||| | ||| | || ||||| || || |||||||| || | Sbjct 1625794 CCTCCACGAAGCCTCAAAACCAGATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGAC 1625735 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||| ||||| ||||||||||| |||||| | |||||||| || || Sbjct 1625734 AGTGTGCGGCCGTCCTCGAGCTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGGGGG 1625675 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||||||||| |||||| || | | ||| | |||||| | | || ||| Sbjct 1625674 ATACCTTCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTGTCAGACGCCTCAACT 1625615 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 || | || | ||||| || ||||| ||||| ||||| || |||||| || Sbjct 1625614 TCCAACGTGATGGTCTTTCCTGTCAAGGTTTTGACGAAAATCTGCATACCT 1625564 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 137261 ||| ||||| | || ||||| || || || ||||| || || |||| | ||| || Sbjct 1624637 AACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCTGACAAGGTGCGCCCGTCCTC 1624578 Query 137262 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 137321 ||| || || ||||| |||||| ||| |||||||| || || ||||||||||| || Sbjct 1624577 GAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGGGATGCCTTCTTTATCCTG 1624518 Query 137322 AATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTT 137381 ||| || ||| | | || | |||||| | | ||| || || | ||| | ||||| Sbjct 1624517 AATCTTCGCTTTGACATTCTCAATCGTGTCCGAAGCTTCGACCTCCAAAGTGATAGTCTT 1624458 Query 137382 GCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || ||||| ||||| ||||| || ||||| Sbjct 1624457 TCCTGTCAAAGTTTTAACGAAGATCTGCAT 1624428 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 137268 |||| || || ||||| || ||||||||||| | ||||| ||| ||||| ||| Sbjct 1625998 TGAAGCGTGGACTCTTTCTGAATGTTGTAATCAGAAAGTGTGCGGCCGTCCTCGAGCTGT 1625939 Query 137269 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 137328 ||||| || |||| | | |||||||| ||||| || ||||||||||| |||||| Sbjct 1625938 TTACCGGCGAAGATTAACCTCTGCTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTTC 1625879 Query 137329 TGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 137388 || | | ||| | |||||| | | || ||||| | || | ||||| || ||| Sbjct 1625878 GCCTTCACGTTTTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTC 1625819 Query 137389 AATGTTTTTACGAATATTTGCATAGCT 137415 || ||||| ||||| || |||||| || Sbjct 1625818 AAGGTTTTGACGAAAATCTGCATACCT 1625792 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || |||||||| | || ||||| | |||||||| || || || ||||| || Sbjct 1624882 CCACCACGTAAACGGAGCACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAA 1624823 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| || ||||| ||||| || ||| |||||| | || || || || || Sbjct 1624822 AGTGTGCGACCATCCTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGGTCCGGTGGA 1624763 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 |||||||||||||| ||||||| ||| | | || | ||||| | | ||| || Sbjct 1624762 ATGCCTTCTTTGTCCTGAATTTTTGCTTTGACATTCTCGATTGTGTCCGAAGCTTCAACC 1624703 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | ||| | ||||| || |||| ||||| ||||| || ||||| Sbjct 1624702 TCCAAAGTGATGGTCTTTCCTGTCAGGGTTTTAACGAAGATCTGCAT 1624656 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 |||||| ||||| | || ||||||||||| ||||||||||| | |||| ||| Sbjct 1625324 CAAAACCAAATGCAACGTGGATTCTTTTTGAATGTTGTAATCAGAAAGCGTGCGGCCGTC 1625265 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||||| |||||||| || |||||| | |||||||| || || || ||||| || || Sbjct 1625264 CTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTATC 1625205 Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378 |||||| ||| | | || | |||||| | | || || || | || | || Sbjct 1625204 CTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGATGCCTCAACCTCCAGTGTGATGGT 1625145 Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || || || || ||||| ||||| ||||||||| Sbjct 1625144 TTTTCCTGTTAAGGTTTTAACGAAAATTTGCATA 1625111 >seq61987 Length=372 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 |||||||||||| | ||| |||||||| || ||||| ||||| | |||| || Sbjct 76 CAAAACTAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAGAGCGTGCGACCATC 135 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||||||||||| || ||| |||||| | ||||||||| || || || ||||| || || Sbjct 136 CTCGAGTTGTTTTCCGGCAAAGATCAACCTTTGCTGATCTGGGGGGATTCCTTCCTTATC 195 Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378 |||||| ||| | | || | |||||| | | || ||||| | || | || Sbjct 196 CTGAATTTTGGCTTTGACATTCTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGT 255 Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 ||| || ||||| ||||| ||||| || |||||| || Sbjct 256 CTTTCCTGTCAAGGTTTTGACGAAAATCTGCATACCT 292 >seq61286 Length=444 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 ||| || ||||| | || |||||||| || ||||||||||| | |||| ||| Sbjct 180 CAATACCAAATGCAACGTGGATTCTTTCTGAATGTTGTAATCAGAAAGCGTGCGGCCGTC 239 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||||| |||||||| ||| |||||| | |||||||| || || || ||||| || || Sbjct 240 CTCGAGCTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCCTTATC 299 Query 137319 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGT 137378 |||||| ||| | | || | |||||| | | || ||||| | || | || Sbjct 300 CTGAATTTTGGCTTTGACGTTCTCGATCGTGTCAGACGCCTCAACTTCCAACGTGATGGT 359 Query 137379 CTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 ||| || ||||| ||||| ||||| || |||||| || Sbjct 360 CTTTCCTGTCAAGGTTTTGACGAAAATCTGCATACCT 396 >seq24285 Length=372 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 137202 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTC 137261 ||| ||||| | || ||||| || || || ||||| ||| || || | | || || Sbjct 296 AACCAAATGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGACAGGGTACGCCCATCCTC 237 Query 137262 GAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 137321 ||| || || ||||| |||||| ||| |||||||| || || ||||||||||| || Sbjct 236 GAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCAGGCGGGATGCCTTCTTTATCCTG 177 Query 137322 AATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTT 137381 ||| || ||| | | || | |||||| | | ||| || || | ||| | ||||| Sbjct 176 AATCTTCGCTTTGACATTCTCAATCGTGTCCGAAGCTTCAACCTCCAAAGTGATGGTCTT 117 Query 137382 GCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || |||| ||||| ||||| || ||||| Sbjct 116 TCCTGTCAGGGTTTTAACGAAGATCTGCAT 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488068964241600