Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq43336 338 6e-88 seq1998 262 4e-65 seq1985 187 2e-42 seq37382 159 3e-34 seq1991 138 1e-27 seq39135 87.8 2e-12 >seq43336 Length=1079 Score = 338 bits (374), Expect = 6e-88 Identities = 362/475 (76%), Gaps = 4/475 (1%) Strand=Plus/Plus Query 7 GCTACGTTCGCACCTGCGAGCCGTAAGCAACAGATGGTTCTCGAATCCAAGGCCCAGATC 66 || |||||||| || || || ||| ||||||||| | || |||| | || |||| Sbjct 606 GCCACGTTCGCTCCCGCCAGTATTAAACAACAGATGATCCTTAAATCAGACGCTGAGATT 665 Query 67 CTCGTCATGGGTGGTGCAGCAGGTTCAGGTAAGTCTTACCTGCTCCAGTTGATGCCGCTC 126 || |||| || ||||| || |||||||| ||||| || ||||| ||||| ||||| || Sbjct 666 CTAATCATCGGCGGTGCTGCTGGTTCAGGGAAGTCCTATCTGCTTCAGTTAATGCCTCTG 725 Query 127 CTGATTGTGGACGATCCTCGTACAGCATGTATCATGTTCCGCCGTACAGTGCCTCAGATT 186 | ||| | ||||| || || ||||| ||| ||||||||||||| |||| || ||| | Sbjct 726 TTTATTATTGACGACCCGCGAACAGCCTGTGTCATGTTCCGCCGATCAGTACCACAGCTA 785 Query 187 CGTGGTCAGGGCGGTCTGTTCGACAAGGCTAAAGATATTTACAACCAGCTTCCA--CCAA 244 |||||||| || |||||||| |||||||||||||||||||| ||||| | || | ||| Sbjct 786 CGTGGTCAAGGTGGTCTGTTTGACAAGGCTAAAGATATTTATAACCAAC-TCGATGTCAA 844 Query 245 TCGTCAAGCCGAAGTTCAAAGAGAACGAGATGATTGCGACGTTCCCTAACGGGGCGACGG 304 | || | | ||| ||||| |||||| || ||||| |||||||| | | Sbjct 845 CTCTAAACCACGATTTC-GTGAGAATGAGATGGAAGCTTTATTCCCAAACGGGGCTAAAG 903 Query 305 TGAAGTGGCAGTCCATGCAGCATATCAACGATAAGTACAACATCCAGGGTCTGGAATTTA 364 | ||||||||||| |||||||| | || | ||| |||| ||||| || ||||||| Sbjct 904 TTAAGTGGCAGTCGATGCAGCACGTAAAGAACAAGCTTGACATTCAGGGCCTAGAATTTA 963 Query 365 CTTTTATCGGCGTGGACGAAGGGACACAGTTTGAGTGGGAACAGCTTGAGTACATGATGT 424 ||||||| ||||| ||||||| || |||||||| ||||||||||| || |||||||||| Sbjct 964 CTTTTATAGGCGTAGACGAAGCCACCCAGTTTGAATGGGAACAGCTCGAATACATGATGT 1023 Query 425 CTCGTTTGCGTTCTGGCTCGAAATATCCTTCCCGCATGGTTATCTCTTGTAACCC 479 ||||||||||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 1024 CTCGTTTGCGTTCATCTTCTAAATACCCGTCCCGAATGGTTATGTCATGTAACCC 1078 >seq1998 Length=468 Score = 262 bits (290), Expect = 4e-65 Identities = 301/403 (75%), Gaps = 4/403 (1%) Strand=Plus/Minus Query 2191 GGCGTATCACCACTGGTAGGATGTTACCGCGCCTGGCGTGAAAAGATTCTGATTGAGAAC 2250 || || ||||| || || || ||||||||||| | || |||||| |||| ||||||||| Sbjct 402 GGTGTTTCACCTCTAGTTGGTTGTTACCGCGCTTTCCGAGAAAAGGTTCTTATTGAGAAC 343 Query 2251 CTCGAAGTCGTTGGTGCCACCAAGGACATGGGCGGCGTGATCGAGTTGAAGATCCCTTCC 2310 | |||||| | || || || |||||| | ||||| | || ||| | ||||| |||||| Sbjct 342 TTGGAAGTCATCGGGGCAACTAAGGACCTCGGCGGGATCATTGAGCTTAAGATTCCTTCC 283 Query 2311 CAGATCCTCAACAAGGCTGCTATGGACCCGTCCTCCCCGGAAGCGGAGATGGTTCGTGGC 2370 ||||| |||||||| || || ||| | ||| ||||| || |||||| || Sbjct 282 AGTATCCTTAACAAGGCAGCAATCGACAAGAATAGCCCAGAAGCTGAAATGGTTGAAGGA 223 Query 2371 CTGATGGAAGATGCTGCAAACGCCCACTCCGGTGAGCAGTCCTTCTTCATGCTGCCTTCT 2430 ||||| | ||||| || ||||||||| | ||||||||| ||||||||||| |||| || Sbjct 222 TTGATGCAGGATGCGGCTAACGCCCACGCAGGTGAGCAGGCCTTCTTCATGTTGCCGTCA 163 Query 2431 GACACCAAGGATAACGCCCCTCAGTATTC--CATGACCCTGAAAGGGATCGATGGGATGG 2488 || | ||||| |||||||| || |||| |||||| || ||||| ||||| || | Sbjct 162 GATATGAAGGAAAACGCCCC--AGCATTCTCCATGACACTTAAAGGTATCGAAGGTTCCG 105 Query 2489 GCAAGCAGTACAGTACCGCACAGTTGATTAGCGACCGTAAGAAGTCCATCCTTGACCGCC 2548 | |||||||| || || || | || || || ||||||||||| ||| | |||||| Sbjct 104 GTAAGCAGTATAGCACTTCAGCCCTAATCAGTGAACGTAAGAAGTCTATCTTGGACCGCT 45 Query 2549 TCGGTGCCGGATTCATCAACGTGGGTAACGACAAGGGCGGTTC 2591 |||| || || || || ||||| ||||| ||||| |||||||| Sbjct 44 TCGGCGCTGGCTTTATGAACGTAGGTAATGACAAAGGCGGTTC 2 >seq1985 Length=318 Score = 187 bits (206), Expect = 2e-42 Identities = 203/270 (75%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 14688 AGGTAAAACTTCATCCGGTCAGTACGTTGACGTGATTCGCTTCTCCCACTGGGTTAAGTT 14747 ||||||| ||| || |||| ||| | |||||| || ||||| ||||||||| | ||||| Sbjct 303 AGGTAAATGTTCTTCTGGTCNGTATGCTGACGTTATCCGCTTNTCCCACTGGTTGAAGTT 244 Query 14748 CCGTATGGAAGAATCCGTGTTTGCGTACATGAAACGCCGTTCTGACATGGGCCTGTCCAT 14807 |||||||||||| || || || | |||||| | | || || ||||||| ||||||| Sbjct 243 CCGTATGGAAGAGTCAGTATTCTCCTACATGCACCAGCGCTCAAACATGGGTATGTCCAT 184 Query 14808 GAAGATGAGCGACGAAGACCTTCCAGTTCTGAAGTCTGTACTGATGAACAACCCGATCAA 14867 ||||||||||||||| ||| | ||| |||| |||| | ||||| | || || || Sbjct 183 GAAGATGAGCGACGATGACTTGCCAAACCTGAGCACTGTGATCCTGAACGATCCTATTAA 124 Query 14868 CATCGGTATTCGTAACGGTGCTATCCTGACTGGTTATGACACTGAAAACAAAGTGTCTTA 14927 | | ||||||||||| ||| | ||| | || || ||||| |||||||| || | || Sbjct 123 CGTAGGTATTCGTAATGGTTCCATCTTAACCGGATATGATGAGGAAAACAAGGTCTTCTA 64 Query 14928 TGACCCGACGATCACCATTCCGAAACGCGC 14957 ||||| | ||||||||||| ||||| || Sbjct 63 CGACCCAATCATCACCATTCCAAAACGAGC 34 >seq37382 Length=576 Score = 159 bits (176), Expect = 3e-34 Identities = 351/519 (68%), Gaps = 8/519 (2%) Strand=Plus/Minus Query 55913 ACCCATCTTAACCCCGGCACCGACGAACATACCCTCACCGAGACGACGGCCCAAAGTCAG 55972 |||||| || || || ||||| | ||| ||||||||||| ||| ||||||| |||| Sbjct 517 ACCCATTTTTACACCAGCACCAATGAAGTAACCCTCACCGATACGTCGGCCCAGAGTCTT 458 Query 55973 GCGGGTCATCGTAGGCCAAGGCCATTTCTTACCGAGCTTAGGGATCTCGTGCGCTTTCTC 56032 |||||| |||||||||||||| || | ||||||||| || ||||| Sbjct 457 CTTGGTCATGGTAGGCCAAGGCCACGGACGGCCCAAGACAGGGATCTCTTGAGCTTTAGT 398 Query 56033 ACGGAACTGAGAATAAGTCGCAAAACCATCCGGCACGTATTCCTTTGGCTTCATCGCCGC 56092 ||||| ||| ||| || ||||| || || | ||| || | || ||||| | Sbjct 397 ACGGATCTGCTCATAGGTTCGGAAACCGTCAGGGATGTACTCGATAGGTTTCATGATTGA 338 Query 56093 CCAGAAAAGCTGGTCGGCAAGGCCCTTGTTGTACATGTCGCACGGGTCCATGTCTTCCGG 56152 |||||| | ||||| || | || | | |||||| || ||||| ||| | || || || Sbjct 337 CCAGAACAACTGGTTAGCCATACCTTCGCCGTACATATCACACGGATCCTTATCATCTGG 278 Query 56153 GATATCGACAACCTTCATCTGTGGGATAACGGAATACACCGCTGCCACAGCGTCTTTACC 56212 | || | || |||||| || |||| ||||| ||| || || |||||||| Sbjct 277 CAGGTCAGCTACACGCATCTGAGGAATAAGAGAATAAACCTGAGCTGTTGCCTCTTTACC 218 Query 56213 CTTCATGATACCCTTGGCCTTCTCTGCTTCGTTAGCACGGTCAGCGTCGAATGCCACAAT 56272 || || ||||||| |||||| || || | || || || || || |||||| Sbjct 217 TTTGATAATACCCTGCTGCTTCTCCGCATCAGTTGCCTTATCCGCATCAAAA--CACAAT 160 Query 56273 --GATCTCTTCGAACTTGCTCAACA-ACTTATAGTTGTTCTTCTGAGACAGGTTCTGCAC 56329 ||||| |||| ||| ||| ||| | ||| ||| |||||||| || ||| | || Sbjct 159 ACGATCTGTTCGTGCTT-CTCCACATATTTAAGGTTCTTCTTCTGGCCCAAGTTACGGAC 101 Query 56330 TGCGTTAGAGGTGCCGTTGGAGATAGACACCACCGTGAAGTTTGGCTTACGTGCGTTGCC 56389 || || || ||||||||||| | || | ||||| ||| |||||| | | | || Sbjct 100 AGCATTGGAAGTGCCGTTGGATACGGAGATTACCGTTGGGTTGATCTTACGAGTGCTACC 41 Query 56390 ATC-CTTCGCTTTGTACTTCTCGCGGAGGACTTGCCACA 56427 ||| | || |||| || ||||| || | | ||||||||| Sbjct 40 ATCACGTC-CTTTATAGTTCTCTCGCATGGCTTGCCACA 3 >seq1991 Length=333 Score = 138 bits (152), Expect = 1e-27 Identities = 237/336 (71%), Gaps = 6/336 (2%) Strand=Plus/Minus Query 123516 CAACGTGCTGAATGTAGATGCGTCCTGTCTGACTGCGCTCCTGCATAGCCACGGAGAAGG 123575 ||||||| || || || || ||||| ||||| | ||||||||| | || ||||| | Sbjct 333 CAACGTGTTGGATATAAATACGTCCAGTCTGTGTACGCTCCTGCGCTGTAACAGAGAAAG 274 Query 123576 CTTCTGCTGCGGAGATG-CTTTTCTTAGCCACTTCCGGATCGGCTTCCAACTTCTCGTAC 123634 |||| ||| ||| |||||| | | | | ||||| ||| | ||| ||| Sbjct 273 CTTCCAATGCATCGATCTCTTTTCGTGGAACCGTA-GGATCCTTTTCAAGCTTAGTATAC 215 Query 123635 AACTCTTCAAATTTCTTCTGGTCGGAGAAGAAATACTCG-TACAGCTTGCCACCTGCAAC 123693 ||| | |||||| | ||| || ||||| | ||| || || | || || || || Sbjct 214 AACGCCTCAAATCCATCCTGATCTTCAAAGAAG-AGTCGGTAAAGTTCACCTCCCGCCAC 156 Query 123694 GTTCGGGTGGAACAGAGTGATATTTCGCCCATGTTGCAGACGTGCATACAGCATTTTGTT 123753 |||||| |||||||| | ||| || | ||| || ||||| ||||| || ||||| Sbjct 155 GTTCGGATGGAACAGGGAGATTTTACCTCCAGTCTGAAGACGCTTATACATCAACTTGTT 96 Query 123754 GATTTGCAGGCCGTAGTCAACGTGACGAGCACGGGTGCTCT-CTGTGCCACGGTTGTTCT 123812 | ||||| |||||||||||| || ||| |||| || |||| |||| || ||||| |||| Sbjct 95 CAATTGCAAGCCGTAGTCAACATGGCGAACACGTGT-CTCTTCTGTTCCTCGGTTATTCT 37 Query 123813 TCATCACGATCAGGTTTTCGAAATCCCAGTGCCACA 123848 | | || ||||| | ||| |||||||||||||||| Sbjct 36 TAAGGACAATCAGCTCTTCAAAATCCCAGTGCCACA 1 >seq39135 Length=635 Score = 87.8 bits (96), Expect = 2e-12 Identities = 322/495 (65%), Gaps = 27/495 (5%) Strand=Plus/Minus Query 21320 ACTGGGGACTGGGTGACCGAACTCGGGTTGGTAGAGACCCGTGGCGAACTTATGCAATAA 21379 ||||| ||||||| ||| | | || | |||| |||||| ||||||| |||| Sbjct 611 ACTGGAGACTGGGAGACAGTGATGGGTGTTTCAGAGGTACGTGGCAAACTTATTGAATA- 553 Query 21380 GGAGTTGACGTGGCA--TATACTGACCGCTATGATGCAGCATTCGGGATTTACATCTCCC 21437 |||| | | ||||| | | | || | | |||||| || ||||| || | ||| | Sbjct 552 GGAGATTATATGGCAGCTGTGCAGA--GATTTGATGCCGCTTTCGGCATCTT--TCTGCG 497 Query 21438 --GTTTCCTGCGTAACAACGTCCACACGAATATCCGTGGCAAAGTGGTCGGGGTGAATTA 21495 | | |||| ||||| | || || | |||||||| || || || || |||| Sbjct 496 TAGATGGATGCGAGACAACATGCATACCTCACTACGTGGCAAGGTTGTAGGTGTAGATTA 437 Query 21496 CAAAGGGCCGTCCGTTGATGTTCAGCCGATGGCCTACACAGAGTTCCCCTCCGGCACCAC 21555 | ||| || | ||||| ||||| || ||||| | |||| ||| || | | ||| Sbjct 436 CTCAGGACCTACGGTTGACGTTCAACCTATGGCTAAGACAG---TCCTTTCTGACGGCAC 380 Query 21556 TGA---CCGATACCCGGTCATTTATGATGTTCCCGTTCTTCTTCCATCGGGAGCGAACGG 21612 ||| | ||||||| ||| | | ||||||| || | || || || ||| || || Sbjct 379 TGAAGACGGATACCCTACCATCTTTAATGTTCCGGTACAACTACCGTC---AGCTAATGG 323 Query 21613 C---AAGGCCCGTCTCACGATGCCGATCAAGCCGGGGGATATCGTCGGCCTGTCCTTCTC 21669 ||||| || || || |||||||||||| || ||||| || ||| | |||||| Sbjct 322 AGGAAAGGCTCGCCTAACCATGCCGATCAAGGTTGGTGATATGGTTGGCATTAACTTCTC 263 Query 21670 TGAACGAAACGAGGGGGATAAC---AACGATCAGAACACCCATCAGCTTTTTGCAGGTTG 21726 || ||||||| |||||| ||| || | ||| ||| | || ||||||| Sbjct 262 AGAGAGAAACGA---AGATAACTCTTCCGACCAAAGCACTCATGGATTGTTCGCAGGTTT 206 Query 21727 GGCTGTGACCCAGATCTTTACGGATGATAACTCGAAGGCTATTCACCCGGACAACGTCGT 21786 ||||| || |||||| || || ||| | || |||| |||| || || || || Sbjct 205 CGCTGTCACTGAGATCTACACACCAGAAAACGCTAAACCTATCGACCCTGATAAGGTAGT 146 Query 21787 GTTGGAGAATGACAA 21801 | ||||| || || Sbjct 145 CCTTGAGAACGATAA 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485556209896320