Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_023856.1 Length=152460 Score E Sequences producing significant alignments: (Bits) Value seq2061 284 1e-71 seq2042 168 7e-37 >seq2061 Length=505 Score = 284 bits (314), Expect = 1e-71 Identities = 328/439 (75%), Gaps = 2/439 (0%) Strand=Plus/Minus Query 127609 AACCAGATTAACAGCATCGTGACCTTCTCCAATGAAGGTATCGTGTTGTATGGTGACAAA 127668 |||||||| ||||||||||| |||||| ||| |||||| ||||||||||| ||||||||| Sbjct 474 AACCAGATCAACAGCATCGTTACCTTCACCACTGAAGGCATCGTGTTGTACGGTGACAAA 415 Query 127669 ACTGGTCTGACTCGTCCGTCTGCTTTCGATCGTATCAATGTTCGCGGTCTGTTTATTATG 127728 || || ||||| || || ||| ||||| || ||||| || || ||| ||||| ||| Sbjct 414 ACCGGCCTGACCCGCCCAAGTGCGTTCGACCGCATCAACGTCCGTGGTACTTTTATCATG 355 Query 127729 GCAGAACAGAACATCGCTGCAATCGCCAAATATTACCTTGGTGAGAACAATGATGCGTTC 127788 || || |||||| |||| || || ||||| ||||| || ||||| || |||||||| Sbjct 354 GCTGAGACCAACATCTCTGCCATTGCTAAATACTACCTGGGCGAGAATAACGATGCGTTT 295 Query 127789 ACTCGC-AGTCTGTTCAGCAACGCTGTTCGTCCTTATATTCGCCAACTGGCAAATATGGG 127847 || ||| ||| |||||| |||||| || || ||| ||||||| ||| ||||| Sbjct 294 ACGCGCCAGT-TGTTCACCAACGCGGTCACCCCATATGTTCGCCAGCTGATCGGCATGGG 236 Query 127848 TGCGATCTACGATGGTAAAGTCAAGTGTGACGAAGATAACAACACTGCTGATGTTATCGC 127907 ||| ||| ||||||||| ||||| ||||||||||| |||||| | ||| ||| | || Sbjct 235 TGCAATCGTCGATGGTAAGGTCAAATGTGACGAAGACAACAACCCGGCTTCGGTTGTAGC 176 Query 127908 AGCCAACACCATGGTTGCAGGCATTTGGTTGAAGCCTGAGTACAGCATTAATTGGGTATA 127967 |||||| ||| | ||||| || ||| |||| || || |||||||| || ||| | || Sbjct 175 CGCCAACCAAATGATCGCAGGTATCTGGCTGAAACCAGAATACAGCATCAACTGGATCTA 116 Query 127968 TTTGGATTTTGCTGCAGTTCGACCAGATATGGAATTCTCCGAGATCGAATCAGGCGGCGG 128027 | ||||| || || || || || || || | |||||||| | ||| ||| || Sbjct 115 CCTCGATTTCGCAGCCGTCCGTCCGGACATTGCGTTCTCCGAAGTGGAAGGTGGCATGGG 56 Query 128028 CATCGTTGCTGCATCCTAA 128046 |||||| || || || ||| Sbjct 55 CATCGTGGCCGCGTCATAA 37 >seq2042 Length=482 Score = 168 bits (186), Expect = 7e-37 Identities = 215/296 (73%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 130887 GAGAAACGCGCATTCTATCTTGACGTCGGTACTCTCGGTAAGAAATCTGCTGAAGAATAC 130946 ||||| ||||||||||| ||||||||||||| | ||||||||||| |||||||| || Sbjct 482 GAGAAGCGCGCATTCTACCTTGACGTCGGTATGTTGGGTAAGAAATCCGCTGAAGAGTAT 423 Query 130947 ATGACCATGATGATGGGTAAATTCAAAAACCGCAACGCATATGACCGCACCACTGGTAAG 131006 ||| ||||||||||||| || || || ||| | ||||| |||| || || ||| Sbjct 422 ATGGCCATGATGATGGGCAAGTTTAAGAACAACCTGTCATATAACCGTCAGACCGGCAAG 363 Query 131007 ATAACAGGTAATGCCCATCTTATGGGTATTGCAGAGGATTATTGGTTGCCGCGCCGCGAA 131066 || ||| | | || || |||||||| || ||||| || ||| |||| || || || Sbjct 362 GTACAAGGCGACACTCACCTCATGGGTATCGCTGAGGACTACTGGATGCCACGTCGTGAG 303 Query 131067 GGTCAGAATGCTACAGAGATCGCGACTGTTGGGGGTGGGAATCAATTGGGTGAAATGGAT 131126 || ||||| || || || || || | || || || | || |||| |||||||| Sbjct 302 GGACAGAACGCGACCGAAATAAGCACCATCGGTGGCGGTGACCAGCTGGGCCAAATGGAT 243 Query 131127 CACGTGAACTATTTCCGTGAAAAACTCTATGATGCTCTAATGATCCCTAAGAGCCG 131182 || ||||| || ||||| || || || | |||||| | ||| ||||||||||| Sbjct 242 CATGTGAATTACTTCCGCAGCAAGCTGTACGGTGCTCTCAAGATTCCTAAGAGCCG 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487269742121600