Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_024122.1 Length=162910 Score E Sequences producing significant alignments: (Bits) Value seq2061 306 4e-78 seq2042 167 2e-36 >seq2061 Length=505 Score = 306 bits (338), Expect = 4e-78 Identities = 336/446 (75%), Gaps = 6/446 (1%) Strand=Plus/Minus Query 113482 AATCAGATCAACAGCATCGTAACCTTCTCCAATGAAGGCATCGTCCTGTATGGTGACAAA 113541 || ||||||||||||||||| |||||| ||| |||||||||||| |||| ||||||||| Sbjct 474 AACCAGATCAACAGCATCGTTACCTTCACCACTGAAGGCATCGTGTTGTACGGTGACAAA 415 Query 113542 ACTGGCCTGACCCGCCCGTCGGGGTTTGACCGTATCAATGTTCGTGGCCTGTTCATCATG 113601 || |||||||||||||| | ||| ||||| ||||| || ||||| || |||||| Sbjct 414 ACCGGCCTGACCCGCCCAAGTGCGTTCGACCGCATCAACGTCCGTGGTACTTTTATCATG 355 Query 113602 GCTGAGCAGAACATCGCCGCAATCGCCAAATACTATCTTGGTGAGAACAATGACGCGTTT 113661 |||||| |||||| | || || || |||||||| || || ||||| || || |||||| Sbjct 354 GCTGAGACCAACATCTCTGCCATTGCTAAATACTACCTGGGCGAGAATAACGATGCGTTT 295 Query 113662 ACACGTGGTCTGTTCAGCAATGCGGTTCGTCCATATATTCGCCAGCTGGCAAATATGGGC 113721 || || |||||| ||| ||||| |||||| ||||||||||| ||||| Sbjct 294 ACGCGCCAGTTGTTCACCAACGCGGTCACCCCATATGTTCGCCAGCTGATCGGCATGGGT 235 Query 113722 GCGATTTACGATGGTAAAGTCAAGTGTGATGAAGATAACAACACTGCTGATGTCATTGCG 113781 || || ||||||||| ||||| ||||| ||||| |||||| | ||| || | || Sbjct 234 GCAATCGTCGATGGTAAGGTCAAATGTGACGAAGACAACAACCCGGCTTCGGTTGTAGCC 175 Query 113782 GCAAACCAAATGGTTGCAGGCATTTGGTTGAAGCCTGAGTACAGCATTAATTGGGTCTAC 113841 || ||||||||| | ||||| || ||| |||| || || |||||||| || ||| ||||| Sbjct 174 GCCAACCAAATGATCGCAGGTATCTGGCTGAAACCAGAATACAGCATCAACTGGATCTAC 115 Query 113842 TTAGATTTTGCTGCAGTTCGACCAGATATGGAGTTCAGCGAAATCGAATCCGGTGGC--- 113898 | ||||| || || || || || || || | |||| |||| | ||| |||||| Sbjct 114 CTCGATTTCGCAGCCGTCCGTCCGGACATTGCGTTCTCCGAAGTGGAA---GGTGGCATG 58 Query 113899 GGCATCGTTGCTGCTTCATAAAAATG 113924 |||||||| || || |||||| |||| Sbjct 57 GGCATCGTGGCCGCGTCATAACAATG 32 >seq2042 Length=482 Score = 167 bits (184), Expect = 2e-36 Identities = 218/299 (73%), Gaps = 6/299 (2%) Strand=Plus/Minus Query 115935 GAGAAACGCGCATTCTATCTTGACGTCGGTACTCTCGGCAAGAAATCTGCTGAAGAATAC 115994 ||||| ||||||||||| ||||||||||||| | || |||||||| |||||||| || Sbjct 482 GAGAAGCGCGCATTCTACCTTGACGTCGGTATGTTGGGTAAGAAATCCGCTGAAGAGTAT 423 Query 115995 ATGACTATGATGATGGGTAAATTCAAAAACCGTAA--TGCC-TACGACAGGACCACTGGT 116051 ||| | ||||||||||| || || || ||| || || | || || | || || Sbjct 422 ATGGCCATGATGATGGGCAAGTTTAAGAAC---AACCTGTCATATAACCGTCAGACCGGC 366 Query 116052 AAAATTACAGGCAACGCCCACCTCATGGGGATTGCAGAAGATTATTGGTTGCCTCGTCGT 116111 || | |||| || | ||||||||||| || || || || || ||| |||| |||||| Sbjct 365 AAGGTACAAGGCGACACTCACCTCATGGGTATCGCTGAGGACTACTGGATGCCACGTCGT 306 Query 116112 GAAGGCCAAAACGCCACAGAAATTGCAACTGTTGGTGGTGGGAATCAATTGGGTGAAATG 116171 || || || ||||| || ||||| || | ||||| || | || |||| ||||| Sbjct 305 GAGGGACAGAACGCGACCGAAATAAGCACCATCGGTGGCGGTGACCAGCTGGGCCAAATG 246 Query 116172 GACCATGTGAATTATTTCCGTGAAAAACTCTATGATGCTCTAATGATCCCTAAGAGCCG 116230 || ||||||||||| ||||| || || || | |||||| | ||| ||||||||||| Sbjct 245 GATCATGTGAATTACTTCCGCAGCAAGCTGTACGGTGCTCTCAAGATTCCTAAGAGCCG 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520677226737600