Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq27156 87.8 4e-12 >seq27156 Length=584 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/198 (71%), Gaps = 10/198 (5%) Strand=Plus/Plus Query 305293 TGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATC 305352 ||| ||||| || ||| | || |||||||| | ||| ||||||||| |||||||||| Sbjct 303 TGACATTGTCGAGAGGCATCTCAAAGACAATGACTTGGTGCTGTTCAATCGGCAACCATC 362 Query 305353 ACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATT---ATCTGGATTGACATT 305409 ||||| ||| || || ||| | |||| | |||| || | | | | ||| || Sbjct 363 TCTGCACAAATTGAGCATCATGACACATAGAACCAAAATAATGGAACATCG---GACGTT 419 Query 305410 TCGATTAAATGTAAGTGCTT--GTACGCCTTATAATGCGGATTTTGATGGAGATGAAATG 305467 || || || | ||||| | ||| || || ||| ||||||| || || ||||||||| Sbjct 420 CCGGTTCAACG--AGTGCGTCTGTAATCCGTACAATTCGGATTTCGACGGCGATGAAATG 477 Query 305468 AATATGCATGTACCTCAA 305485 ||| | ||| |||| ||| Sbjct 478 AATTTACATTTACCGCAA 495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185629952638268