Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq6476 125 2e-23 seq6559 116 9e-21 seq34431 114 3e-20 seq34430 113 1e-19 seq61987 100 7e-16 seq24285 100 7e-16 seq61286 95.1 3e-14 >seq6476 Length=10381176 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| ||||| | ||||| ||| ||||||||| |||| Sbjct 5656921 AAAACTCTCACTGGCAAAACCATCACCCTCGAAGTTGAAGCCTCTGACACAATCGAGAAC 5656980 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 ||||| ||||| ||||| |||||||| ||| ||||| || | || || || Sbjct 5656981 GTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCAGCAGCGTCTGATTTTT 5657040 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||| | |||||||| |||||| | | ||||| ||| |||||||||||||| Sbjct 5657041 GCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAACATCCAGAAAGAGTCT 5657100 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || || || | ||| || | |||||| Sbjct 5657101 ACGCTCCATTTGGTTCTGCGTCTTCGA 5657127 Score = 122 bits (134), Expect = 2e-22 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| ||||| | ||||| ||| ||||||||| | ||| Sbjct 5657149 AAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCTGACACAATAGAAAAC 5657208 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--ATC 206301 || ||| || || || || |||||||||||| ||||| |||| || || || Sbjct 5657209 GTGAAGGCCAAAATCCAGGACAAAGAAGGAATTCCACCGGA---TCAACAGCGTTTGATT 5657265 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 ||||| || |||||| ||||||| || || || | ||||||||||| |||| ||||| Sbjct 5657266 TTCGCTGGCAAGCAGCTGGAAGACGGCAGAACCCTTTCCGATTACAACATCCAAAAAGAA 5657325 Query 206362 TCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || ||| | ||||| ||||||| Sbjct 5657326 TCTACACTCCACTTAGTTTTACGACTTCG 5657354 >seq6559 Length=1815223 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | |||||||| || ||||| |||||||| || |||||| Sbjct 1625799 CAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCTGAC 1625858 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| || |||||||| |||||||| ||| || || || Sbjct 1625859 ACGATCGAAAACGTGAAGGCGAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAGCAG 1625918 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| || ||| | || || || | || | | ||||||||| | Sbjct 1625919 AGGTTAATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACACTTTCTGATTACAACATT 1625978 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||||| || ||||||||||| | ||||| || Sbjct 1625979 CAGAAAGAGTCCACGCTTCACCTTGTACTTCGACTTAGA 1626017 Score = 113 bits (124), Expect = 1e-19 Identities = 137/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || |||||||| || ||||||||||| || ||| ||| |||||| |||| Sbjct 1624671 AAAACCCTGACAGGAAAGACCATCACTTTGGAGGTTGAAGCTTCGGACACAATCGAGAAT 1624730 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||||||| ||||| || |||||||| ||| |||||| || ||| | ||||| Sbjct 1624731 GTCAAAGCAAAA-ATTCAGGACAAAGAAGGCATTCCACCGGACCAACAGAGATTGATCTT 1624789 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||||| ||| | || ||||| | || | | || ||||| | ||||| || || Sbjct 1624790 TGCCGGAAAACAGCTCGAGGATGGTCGCACACTTTCTGACTACAATATTCAGAAGGAATC 1624849 Query 206364 TACT 206367 |||| Sbjct 1624850 TACT 1624853 Score = 113 bits (124), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| |||||||| || ||||| ||||| |||| || || ||| ||| Sbjct 1625343 CAGATTTTCGTCAAGACGCTCACGGGTAAAACCATCACACTGGAGGTTGAGGCTTCGGAC 1625402 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| ||||| || ||||| ||| ||||| || || ||||| || || || || Sbjct 1625403 ACAATCGAAAATGTCAAAGCCAAA-ATTCAGGACAAGGAAGGTATCCCCCCAGATCAGCA 1625461 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | ||||||||||| || ||| | || || || | || || | || |||||| | Sbjct 1625462 GAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACACTGTCTGACTACAACAT 1625521 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || || || || || ||||||||||||||||| Sbjct 1625522 TCAGAAGGAATCCACCCTGCATCTTGTTTTGAGACTTCG 1625560 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 |||||||| || ||||| |||||||| || || ||||| |||| || ||||| Sbjct 1624908 ACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCAGACACGATCGAGAATGTCAAAGCC 1624967 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| |||||||| || |||||||| || || ||||| | ||||| |||||||| Sbjct 1624968 AAA-ATTCAAGACAAGGAAGGAATCCCCCCAGATCAGCAAAGGTTGATCTTTGCCGGAAA 1625026 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || | || ||||| | || | | ||||| ||| | |||||||| || || | || Sbjct 1625027 ACAACTCGAGGATGGTCGCACGCTCTCTGATTATAACATTCAGAAAGAATCCACATTGCA 1625086 Query 206373 CCTTGTTTTGAGACTTCG 206390 | |||||||||||||| Sbjct 1625087 TTTAGTTTTGAGACTTCG 1625104 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | |||||||| || ||||||||||| || ||| ||| ||||| | || Sbjct 1624443 AAAACTTTGACAGGAAAGACTATCACTTTGGAGGTCGAAGCTTCGGACACGATTGAGAAT 1624502 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| |||||||| || |||||||| || ||| || || | | ||||| Sbjct 1624503 GTCAAAGC-GAAGATTCAGGATAAAGAAGGCATCCCGCCTGATCAGCAGCGTTTGATCTT 1624561 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| ||||||||| | || || || | || ||| | || ||||| ||||||| || || Sbjct 1624562 CGCTGGAAAGCAGCTCGAGGACGGGCGCACCTTGTCAGACTACAATATCCAGAAGGAATC 1624621 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || | ||| | |||| || Sbjct 1624622 CACTCTCCATTTGGTTCTCCGACTGCG 1624648 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGA-ATC 206243 ||||| | ||||||||||| ||||| |||| || || |||||||| |||| | | Sbjct 1625127 AAAACCTTAACAGGAAAAACCATCACACTGGAGGTTGAGGCATCTGACACGATCGAGAAC 1625186 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||||| ||| ||||| || || |||||||| || || || ||| | ||||| Sbjct 1625187 GTCAAAGCCAAA-ATTCAGGATAAGGAAGGAATCCCCCCAGATCAGCAGAGATTGATCTT 1625245 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| || ||| | || || || | || | | ||||||||| | || ||||| || Sbjct 1625246 CGCCGGTAAACAGCTCGAGGACGGCCGCACGCTTTCTGATTACAACATTCAAAAAGAATC 1625305 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 || | || | |||||||||||||| Sbjct 1625306 CACGTTGCATTTGGTTTTGAGACTTCG 1625332 >seq34431 Length=440 Score = 114 bits (126), Expect = 3e-20 Identities = 153/210 (73%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| |||||| | ||||| ||| ||||||||| | || Sbjct 218 AAAACTCTCACCGGCAAAACCATCACTCTCGAAGTTGAAGCCTCTGACACAATTGAGAAC 277 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--ATC 206301 ||||| ||||| ||||| |||||||| ||| ||||| |||| || || || Sbjct 278 GTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGA---TCAACAGCGTTTGATT 334 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 ||||| || ||||| | |||||||| || ||| | |||| || ||| |||| |||||| Sbjct 335 TTCGCTGGCAAGCAACTCGAAGATGGTAGAACTCTTTCCGACTATAACATCCAAAAAGAG 394 Query 206362 TCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| || || | ||| || | |||||| Sbjct 395 TCTACGCTCCATTTGGTTCTGCGTCTTCGA 424 >seq34430 Length=319 Score = 113 bits (124), Expect = 1e-19 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| ||||| | ||||| ||| ||||||||| | || Sbjct 97 AAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTCTGACACAATTGAGAAC 156 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 ||||| ||||| ||||| |||||||| ||| || || || | | || || Sbjct 157 GTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCAGCAGCGTTTGATTTTT 216 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||| | |||||||| |||||| | | ||||| ||| |||||||||||||| Sbjct 217 GCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAACATCCAGAAAGAGTCT 276 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || || || | ||| || | |||||| Sbjct 277 ACGCTCCATTTGGTTCTGCGTCTTCGA 303 >seq61987 Length=372 Score = 100 bits (110), Expect = 7e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | |||||||| || ||||| |||||||| || |||||| Sbjct 285 CAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCTGAC 226 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||| ||| ||||| || || |||||||| || || || Sbjct 225 ACGATCGAGAATGTCAAAGCCAAA-ATTCAGGATAAGGAAGGAATCCCCCCAGATCAGCA 167 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | ||||| |||||||| || | || ||||| | || | | ||||| ||| | Sbjct 166 AAGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGTCGCACGCTCTCTGATTATAACAT 107 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| || || | || | |||||||||||||| Sbjct 106 TCAGAAAGAATCCACATTGCATTTAGTTTTGAGACTTCG 68 >seq24285 Length=372 Score = 100 bits (110), Expect = 7e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || |||||||| || ||||||||||| || ||| ||| ||||| | || Sbjct 102 AAAACCCTGACAGGAAAGACCATCACTTTGGAGGTTGAAGCTTCGGACACGATTGAGAAT 161 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| |||||||| || |||||||| || ||| || || | | ||||| Sbjct 162 GTCAAAGC-GAAGATTCAGGATAAAGAAGGCATCCCGCCTGATCAGCAGCGTTTGATCTT 220 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| ||||||||| | || ||||| | || || |||| ||||| ||||||| || || Sbjct 221 CGCTGGAAAGCAGCTCGAGGATGGGCGTACCCTGTCCGACTACAATATCCAGAAGGAATC 280 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || | ||| | |||| || Sbjct 281 CACTCTCCATTTGGTTCTCCGACTGCG 307 >seq61286 Length=444 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | |||||||| || ||||| |||||||| || |||||| Sbjct 389 CAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCTGAC 330 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||| ||| ||||| || || |||||||| || || || Sbjct 329 ACGATCGAGAACGTCAAAGCCAAA-ATTCAGGATAAGGAAGGAATCCCCCCAGATCAGCA 271 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | ||||| ||||| || ||| | || || || | || | | ||||||||| | Sbjct 270 GAGATTGATCTTTGCCGGTAAACAGCTCGAGGACGGCCGCACGCTTTCTGATTACAACAT 211 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| || || | || | || ||||||||||| Sbjct 210 TCAGAAAGAATCCACGTTGCATTTGGTATTGAGACTTCG 172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180642927958748