Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_025446.1 Length=157308 Score E Sequences producing significant alignments: (Bits) Value seq2061 356 2e-93 seq2042 168 7e-37 >seq2061 Length=505 Score = 356 bits (394), Expect = 2e-93 Identities = 366/476 (77%), Gaps = 7/476 (1%) Strand=Plus/Minus Query 107339 AACCAGATTAACAGCATCGTGACCTTCTCCAATGAAGGTATCGTGTTGTATGGTGACAAA 107398 |||||||| ||||||||||| |||||| ||| |||||| ||||||||||| ||||||||| Sbjct 474 AACCAGATCAACAGCATCGTTACCTTCACCACTGAAGGCATCGTGTTGTACGGTGACAAA 415 Query 107399 ACTGGTCTGACACGTCCGTCTGCTTTCGATCGTATCAATGTTCGCGGTCTGTTTATTATG 107458 || || ||||| || || ||| ||||| || ||||| || || ||| ||||| ||| Sbjct 414 ACCGGCCTGACCCGCCCAAGTGCGTTCGACCGCATCAACGTCCGTGGTACTTTTATCATG 355 Query 107459 GCAGAACAGAACATCGCTGCAATCGCCAAATATTACCTTGGTGAGAACAATGATGCGTTC 107518 || || |||||| |||| || || ||||| ||||| || ||||| || |||||||| Sbjct 354 GCTGAGACCAACATCTCTGCCATTGCTAAATACTACCTGGGCGAGAATAACGATGCGTTT 295 Query 107519 ACTCGC-AGTCTGTTCAGCAACGCTGTTCGTCCTTATATTCGCCAGCTGGCAAATATGGG 107577 || ||| ||| |||||| |||||| || || ||| ||||||||||| ||||| Sbjct 294 ACGCGCCAGT-TGTTCACCAACGCGGTCACCCCATATGTTCGCCAGCTGATCGGCATGGG 236 Query 107578 CGCGATCTACGATGGTAAAGTCAAGTGTGACGAAGATAACAACACTGCTGACGTTATTGC 107637 || ||| ||||||||| ||||| ||||||||||| |||||| | ||| ||| | || Sbjct 235 TGCAATCGTCGATGGTAAGGTCAAATGTGACGAAGACAACAACCCGGCTTCGGTTGTAGC 176 Query 107638 GGCAAACCAGATGGTCGCTGGTATCTGGCTGAAACCGGAATACAGCATTAATTGGATCTA 107697 || ||||| ||| |||| ||||||||||||||||| ||||||||||| || |||||||| Sbjct 175 CGCCAACCAAATGATCGCAGGTATCTGGCTGAAACCAGAATACAGCATCAACTGGATCTA 116 Query 107698 CTTGGATTTTGCTGCCGTTCGACCGGACATGGAGTTCAGCGAGATCGAGTCCGGCGGCGG 107757 | | ||||| || ||||| || |||||||| | |||| ||| | || ||| || Sbjct 115 CCTCGATTTCGCAGCCGTCCGTCCGGACATTGCGTTCTCCGAAGTGGAAGGTGGCATGGG 56 Query 107758 TATCGTCGCGGCGTCCTAAATATAAGACACATGCCCTCTTCGGAGGGCATTTCAAT 107813 ||||| || ||||| ||| || | ||||||||||||||||||||||||| Sbjct 55 CATCGTGGCCGCGTCATAACAATGTG-----TGCCCTCTTCGGAGGGCATTTCAAT 5 >seq2042 Length=482 Score = 168 bits (186), Expect = 7e-37 Identities = 215/296 (73%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 110488 GAGAAACGCGCATTCTATCTTGACGTCGGTACTCTCGGTAAGAAATCTGCTGAAGAATAC 110547 ||||| ||||||||||| ||||||||||||| | ||||||||||| |||||||| || Sbjct 482 GAGAAGCGCGCATTCTACCTTGACGTCGGTATGTTGGGTAAGAAATCCGCTGAAGAGTAT 423 Query 110548 ATGACCATGATGATGGGTAAATTCAAAAACCGCAACGCATATGACCGCACCACTGGTAAG 110607 ||| ||||||||||||| || || || ||| | ||||| |||| || || ||| Sbjct 422 ATGGCCATGATGATGGGCAAGTTTAAGAACAACCTGTCATATAACCGTCAGACCGGCAAG 363 Query 110608 ATAACAGGTAATGCCCATCTTATGGGTATTGCAGAGGATTATTGGTTGCCGCGCCGCGAA 110667 || ||| | | || || |||||||| || ||||| || ||| |||| || || || Sbjct 362 GTACAAGGCGACACTCACCTCATGGGTATCGCTGAGGACTACTGGATGCCACGTCGTGAG 303 Query 110668 GGTCAGAATGCTACAGAGATCGCGACTGTTGGGGGTGGGAATCAATTGGGTGAAATGGAT 110727 || ||||| || || || || || | || || || | || |||| |||||||| Sbjct 302 GGACAGAACGCGACCGAAATAAGCACCATCGGTGGCGGTGACCAGCTGGGCCAAATGGAT 243 Query 110728 CACGTGAACTATTTCCGTGAAAAACTCTATGATGCTCTAATGATCCCTAAGAGCCG 110783 || ||||| || ||||| || || || | |||||| | ||| ||||||||||| Sbjct 242 CATGTGAATTACTTCCGCAGCAAGCTGTACGGTGCTCTCAAGATTCCTAAGAGCCG 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502768257472640