Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq61987 111 1e-19 seq6559 105 6e-18 seq34431 102 7e-17 seq6476 102 7e-17 seq34430 95.1 1e-14 seq61286 93.3 4e-14 >seq61987 Length=372 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || ||||| || || ||||| | |||||| | ||||| || || Sbjct 288 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCT 229 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || ||| |||||| ||||| || || || || || |||||| Sbjct 228 GACACGATCGAGAATGTCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCCCCAGATCAG 169 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| | || | | ||| ||||||||||| |||| | | | || ||||| || Sbjct 168 CAAAGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGTCGCACGCTCTCTGATTATAAC 109 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 ||||| ||||||||||| | |||||||| || ||| Sbjct 108 ATTCAGAAAGAATCCACATTGCATTTAGTTTTGAGA 73 >seq6559 Length=1815223 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || || || ||||| | |||||| | ||||| || || Sbjct 1624884 ATGCAAATTTTCGTCAAGACTTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCA 1624943 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || ||| |||||| || || || || || || || |||||| Sbjct 1624944 GACACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGAATCCCCCCAGATCAG 1625003 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| | || | | ||| ||||||||||| |||| | | | || ||||| || Sbjct 1625004 CAAAGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGTCGCACGCTCTCTGATTATAAC 1625063 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 ||||| ||||||||||| | |||||||| || ||| Sbjct 1625064 ATTCAGAAAGAATCCACATTGCATTTAGTTTTGAGA 1625099 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| ||||| |||||| | ||||| | || || || || Sbjct 1625112 ATGCAAATTTTCGTTAAAACCTTAACAGGAAAAACCATCACACTGGAGGTTGAGGCATCT 1625171 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || ||| |||||| ||||| || || || || || |||||| Sbjct 1625172 GACACGATCGAGAACGTCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCCCCAGATCAG 1625231 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | || | || ||| ||||| ||||| || | | | | |||||||| Sbjct 1625232 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAGGACGGCCGCACGCTTTCTGATTACAAC 1625291 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 ||||||||||||||||| | ||||| || || ||| Sbjct 1625292 ATTCAAAAAGAATCCACGTTGCATTTGGTTTTGAGA 1625327 >seq34431 Length=440 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| | ||||| ||| | ||||| ||||||| |||||| Sbjct 203 ATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACTCTCGAAGTTGAAGCCTCT 262 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || ||| | |||||| || || || ||||| || || || || ||||| Sbjct 263 GACACAATTGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCAA 322 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | | |||| || ||||| ||||||||||||| ||||| | | ||| || || Sbjct 323 CAGCGTTTGATTTTCGCTGGCAAGCAACTCGAAGATGGTAGAACTCTTTCCGACTATAAC 382 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 || |||||||| || || | ||||| || Sbjct 383 ATCCAAAAAGAGTCTACGCTCCATTTGGT 411 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 25201 CGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAA 25260 ||| ||| | ||||| ||||||| ||||| || || |||||| | |||||| || Sbjct 1 CGGCAAAACCATCACCCTCGAAGTTGAAGCATCTGACACAATCGAGAACGTAAAAGCCAA 60 Query 25261 AATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACA 25320 || || ||||| || || || || ||||| || | || |||| | |||||| || Sbjct 61 GATCCAAGACAAAGAAGGCATTCCCCCGGATCAACAGCGTCTGATTTTTGCCGGCAAGCA 120 Query 25321 ACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCA 25377 ||||||||||| || | | | ||||| || |||||||| ||||| || |||| Sbjct 121 ACTCGAAGATGGCAGGACTCTTTCAGATTATAACATTCAAAAGGAATCTACACTTCA 177 >seq6476 Length=10381176 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| | || || ||| | ||||| ||||||| |||||| Sbjct 5656906 ATGCAAATCTTTGTGAAAACTCTCACTGGCAAAACCATCACCCTCGAAGTTGAAGCCTCT 5656965 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | |||||| || || || ||||| || || || || |||||| Sbjct 5656966 GACACAATCGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCGGATCAG 5657025 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | || |||| | |||||| ||||||||||||| || | | | ||||| || Sbjct 5657026 CAGCGTCTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAAC 5657085 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 || || ||||| || || | ||||| || Sbjct 5657086 ATCCAGAAAGAGTCTACGCTCCATTTGGT 5657114 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | || || ||||| | ||||| ||| | ||||| ||||||| |||||| Sbjct 5657133 CATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTC 5657192 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || | || || ||||| || ||||| || || || || ||||| Sbjct 5657193 TGACACAATAGAAAACGTGAAGGCCAAAATCCAGGACAAAGAAGGAATTCCACCGGATCA 5657252 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 || | | |||| || ||||| || || ||||| | |||| | ||||||||| Sbjct 5657253 ACAGCGTTTGATTTTCGCTGGCAAGCAGCTGGAAGACGGCAGAACCCTTTCCGATTACAA 5657312 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||||||||| || | || ||||| ||| || | | ||||| Sbjct 5657313 CATCCAAAAAGAATCTACACTCCACTTAGTTTTACGACTTCGCGGAGG 5657360 >seq34430 Length=319 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | || || ||||| | ||||| ||| | ||||| ||||||| |||||| Sbjct 81 CATGCAAATCTTCGTGAAAACTCTCACCGGCAAAACCATCACCCTCGAAGTTGAAGCCTC 140 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || ||| | |||||| || || || ||||| || || || || ||||| Sbjct 141 TGACACAATTGAGAACGTAAAAGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCA 200 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| | | |||| | |||||| ||||||||||||| || | | | ||||| || Sbjct 201 GCAGCGTTTGATTTTTGCCGGCAAGCAACTCGAAGATGGCAGGACTCTTTCAGATTATAA 260 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGT 25383 || || ||||| || || | ||||| || Sbjct 261 CATCCAGAAAGAGTCTACGCTCCATTTGGT 290 >seq61286 Length=444 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || ||||| || || ||||| | |||||| | ||||| || || Sbjct 392 ATGCAGATTTTCGTCAAAACCTTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCT 333 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || |||||| | || ||| |||||| ||||| || || || || || |||||| Sbjct 332 GACACGATCGAGAACGTCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCCCCAGATCAG 273 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||| | || | | ||| ||||| ||||| || | | | | |||||||| Sbjct 272 CAGAGATTGATCTTTGCCGGTAAACAGCTCGAGGACGGCCGCACGCTTTCTGATTACAAC 213 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 ||||| ||||||||||| | ||||| || || ||| Sbjct 212 ATTCAGAAAGAATCCACGTTGCATTTGGTATTGAGA 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444661612460160