Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq8374 104 3e-16 seq6679 86.0 9e-11 >seq8374 Length=807232 Score = 104 bits (114), Expect = 3e-16 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAAC 1456155 || ||||| || | || | ||| |||| |||||| | ||||| | || |||||||| Sbjct 792000 GCGATCGAGACACTTCCTTGTGTGGGGAAGAAGGCCAATTGGGCATTAAACTGGATCAAT 792059 Query 1456156 AAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGCG-TCGAGGGCATCT 1456214 | ||| || | ||| ||| | || || | ||| || || ||| ||||||| || | Sbjct 792060 CACGAGAGCG-CTACA-TTTCCTGAACGTATAATCGCGTTCGCGGCGGTCGAGGGTATAT 792117 Query 1456215 TTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTC 1456274 | ||| ||||||||| || || |||||||| ||||| || || ||||||| |||| Sbjct 792118 TCTTCAGCGGCAGTTTCGCAGCGATTTTTTGGCTGAAGAAACGTGGAGTCATGCCAGGTC 792177 Query 1456275 TTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAGT 1456312 | | ||||||||||||| ||||| || |||||||| Sbjct 792178 T-CACCTTTAGCAACGAACTTATCTCGCGAGACGAAGT 792214 >seq6679 Length=3560385 Score = 86.0 bits (94), Expect = 9e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 1818123 GGCACGCCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTA 1818182 || |||||||| | || ||| | | ||| || ||| ||||||||| ||||||| Sbjct 1427010 GGTACGCCCACTTGATCGATGCGCAGATTGGGATCCGGGGTGATGACGGTACGCGCGGAG 1427069 Query 1818183 AAGTTGACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGC 1818242 |||| ||||| || ||||| || || || |||||||||||||| ||||| | ||| Sbjct 1427070 AAGTCCACGCGTTTACCCATCAGGTTTCCACGAATCCTGCCCTCCTTTCCCTTCAGCCGG 1427129 Query 1818243 TCCACGAGGCCCTTGGTGGGCTTGCCCGAC 1818272 || || ||||| ||||||||||||| Sbjct 1427130 GCCTTGATCGCCTTGAGGGGCTTGCCCGAC 1427159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7170308404425656