Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_027119.1 Length=157498 Score E Sequences producing significant alignments: (Bits) Value seq2061 280 1e-70 seq2042 167 2e-36 >seq2061 Length=505 Score = 280 bits (310), Expect = 1e-70 Identities = 325/438 (74%), Gaps = 0/438 (0%) Strand=Plus/Minus Query 5084 AACCAGATTAACAGCATCGTGACCTTCTCCAATGAAGGTATCGTGTTGTATGGTGACAAA 5143 |||||||| ||||||||||| |||||| ||| |||||| ||||||||||| ||||||||| Sbjct 474 AACCAGATCAACAGCATCGTTACCTTCACCACTGAAGGCATCGTGTTGTACGGTGACAAA 415 Query 5144 ACTGGCCTGACTCGTCCGTCTGCTTTCGATCGTATCAATGTTCGTGGCTTGTTCATTATG 5203 || |||||||| || || ||| ||||| || ||||| || ||||| || || ||| Sbjct 414 ACCGGCCTGACCCGCCCAAGTGCGTTCGACCGCATCAACGTCCGTGGTACTTTTATCATG 355 Query 5204 GCAGAACAGAACATCGCTGCAATCGCCAAATATTACCTTGGTGAGAACAATGATGCGTTC 5263 || || |||||| |||| || || ||||| ||||| || ||||| || |||||||| Sbjct 354 GCTGAGACCAACATCTCTGCCATTGCTAAATACTACCTGGGCGAGAATAACGATGCGTTT 295 Query 5264 ACTCGCAGCCTGTTCAGCAACGCTGTTCGTCCTTATATTCGCCAACTGGCAAATATGGGT 5323 || ||| |||||| |||||| || || ||| ||||||| ||| |||||| Sbjct 294 ACGCGCCAGTTGTTCACCAACGCGGTCACCCCATATGTTCGCCAGCTGATCGGCATGGGT 235 Query 5324 GCGATCTACGATGGTAAAGTCAAGTGTGACGAAGATAACAACACTGCTGATGTTATCGCA 5383 || ||| ||||||||| ||||| ||||||||||| |||||| | ||| ||| | || Sbjct 234 GCAATCGTCGATGGTAAGGTCAAATGTGACGAAGACAACAACCCGGCTTCGGTTGTAGCC 175 Query 5384 GCCAACACCATGGTTGCAGGCATTTGGTTGAAGCCTGAGTACAGCATTAATTGGGTATAT 5443 |||||| ||| | ||||| || ||| |||| || || |||||||| || ||| | || Sbjct 174 GCCAACCAAATGATCGCAGGTATCTGGCTGAAACCAGAATACAGCATCAACTGGATCTAC 115 Query 5444 TTGGATTTTGCTGCAGTTCGACCAGATATGGAATTCTCCGAGATCGAATCAGGCGGCGGC 5503 | ||||| || || || || || || || | |||||||| | ||| ||| ||| Sbjct 114 CTCGATTTCGCAGCCGTCCGTCCGGACATTGCGTTCTCCGAAGTGGAAGGTGGCATGGGC 55 Query 5504 ATCGTTGCTGCATCCTAA 5521 ||||| || || || ||| Sbjct 54 ATCGTGGCCGCGTCATAA 37 >seq2042 Length=482 Score = 167 bits (184), Expect = 2e-36 Identities = 217/299 (73%), Gaps = 6/299 (2%) Strand=Plus/Minus Query 8362 GAGAAACGCGCATTCTATCTCGACGTCGGTACTCTCGGCAAGAAATCTGCTGAAGAATAC 8421 ||||| ||||||||||| || |||||||||| | || |||||||| |||||||| || Sbjct 482 GAGAAGCGCGCATTCTACCTTGACGTCGGTATGTTGGGTAAGAAATCCGCTGAAGAGTAT 423 Query 8422 ATGACCATGATGATGGGCAAATTCAAAAACCGTAAC---GCATATGACCGCACCACTGGT 8478 ||| |||||||||||||||| || || ||| ||| ||||| |||| || || Sbjct 422 ATGGCCATGATGATGGGCAAGTTTAAGAAC---AACCTGTCATATAACCGTCAGACCGGC 366 Query 8479 AAAATCACAGGCAACGCCCATCTTATGGGTATTGCAGAAGATTATTGGTTGCCGCGCCGC 8538 || | |||| || | || || |||||||| || || || || ||| |||| || || Sbjct 365 AAGGTACAAGGCGACACTCACCTCATGGGTATCGCTGAGGACTACTGGATGCCACGTCGT 306 Query 8539 GAAGGTCAGAATGCTACAGAGATCGCGACTGTTGGTGGTGGGAATCAATTGGGCGAAATG 8598 || || ||||| || || || || || | ||||| || | || ||||| ||||| Sbjct 305 GAGGGACAGAACGCGACCGAAATAAGCACCATCGGTGGCGGTGACCAGCTGGGCCAAATG 246 Query 8599 GATCACGTGAACTATTTCCGTGAAAAACTCTATGATGCTCTAATGATCCCTAAGAGCCG 8657 ||||| ||||| || ||||| || || || | |||||| | ||| ||||||||||| Sbjct 245 GATCATGTGAATTACTTCCGCAGCAAGCTGTACGGTGCTCTCAAGATTCCTAAGAGCCG 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503375666283840