Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wasmannia_20auropunctata_20[refseq_20GCF_5F000956235.1_202015-03-17] 77,788 sequences; 324,120,201 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq6487 89.7 6e-13 >seq6487 Length=3923646 Score = 89.7 bits (98), Expect = 6e-13 Identities = 229/346 (66%), Gaps = 2/346 (1%) Strand=Plus/Plus Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCT 111135 |||||||||||||||| | |||||| || || ||| | ||||||||||| Sbjct 1175486 ACCAATAGGTCTGTGTTTCCGATTAGATGTTTTCGTCTCCTCGATAGGATAAAAATTAAC 1175545 Query 111136 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA 111195 ||| |||||| || ||||| || || || ||||||| | ||| || ||| | Sbjct 1175546 GTCGATGACTTTGTCCAGATTACGAGTGACGATTTTTGTGACAGTTTTAAGCTTGTCAAA 1175605 Query 111196 ATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCA 111255 ||| ||||| || || ||||||| || | | ||||| || || || ||||| Sbjct 1175606 ATCGAAAGTTTTCGTGTCCGTATTGACAAACATGTTGACAGCGATAGACGCTAAGTTGCA 1175665 Query 111256 AACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTT 111315 ||| || ||| | | | | |||||| | || || ||||| |||||| | || Sbjct 1175666 AACGGCGACCTCCCCAGGACCGGAGTACTCAACGATCTCGGTACACAAGTTGCTGCATTT 1175725 Query 111316 AATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG-TTGCACGCATCCTTGTAGAGCATGT 111374 || || || | || || || || | || | | ||||| ||| ||||| ||||| | Sbjct 1175726 GATAGTGCCGATATGCTGATGATT-CGATTTTCGATTGCAATGATCTTTGTAAAGCATAT 1175784 Query 111375 AGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAAC 111420 | || ||||| ||||| || ||| ||||||| || |||| || Sbjct 1175785 AAGGTGTCCCGGTCTCTACTTGGGATCTGAGAATGGCGATCCACAC 1175830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627421333084800